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… some songbird W chromosomes — suggest that they are advantageous enough to have evolved multiple times independently. … by the National Natural Science Foundation of China (31590821, 31561123001, 31500502, 41871044), National Key Research and …

… of the microbial world through bulk community sequencing (metagenomics) and single-cell genomics, the vast majority of … allow researchers to focus on specific microbes within metagenome samples and associate their sequences with their … Facility, is supported under Contract No. DE-AC02-05CH11231. This study was funded by the Max Planck Society. …

… think like it’s, it’s this unique time where the preceding 300 years, that change was not occurring at that pace, right. And then, hopefully, 3-400 years down the road we’ll have a steady state where we …

… use to conduct a similar type of search in microbial and metagenomic databases. In this case, the machine “learned” to … search tool combed through more than 70,000 microbial and metagenome datasets, ultimately identifying more than 10,000 … By the numbers, the new approach detected inoviruses in 3,609 (6 percent) of the 56,868 microbial genomes and 2,249 …

… which is best for the task at hand. “There are at least 30-40 programs and it is not clear which are the best to …

… and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the study of the microbial communities in the … sequencing and analysis. “Using a technique called metagenome binning, we were able to reconstruct thousands of … BGCs in  IMG/ABC (Atlas of Biosynthetic Gene Clusters) by 31%. ( Listen to this JGI Natural Prodcast episode on genome …

… an organism’s fitness. Moreover, the discovery of more than 30,000 DGRs in this analysis, a 20-fold increase over what … sampled all at once from the same environment, called metagenomes. Why? Simon Roux, who led the research team and is … U.S. Department of Energy under contract no. DE-AC02-05CH11231. This research used resources of the National Energy …

During the summer of 2021, 13 interns from UC Merced spent eight weeks working virtually … … Evaluation of Binning Tools for Microbial Eukaryotes in Metagenomes … Functional exploration of Phage Impact on … of Rice and Arabidopsis Roots … Making Big Data Metagenomic Clustering Scalable … Cataloging Lineage Specific …