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Natural Prodcast Episode 6: Marc Chevrette
… have no extra genes hanging around, they still dedicate 20-30% of their genome to secondary metabolism. So it’s very … system. [ Go here to learn more about Cameron Currie’s metagenomics research, enabled in part by JGI’s Community … have something to do with it. We saw hints of a rare advantage. So if you’re not the most popular pathogen, you can …
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Genome Sequence of Arenibacter algicola Strain TG409, a Hydrocarbon-Degrading Bacterium Associated with Marine Eukaryotic Phytoplankton
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… through JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) system, reached  Emiley Eloe-Fadrosh , who heads the  Metagenome Program . “After discussing the project with him, I … because we have the resources as a user facility. The Metagenome Program team provided guidance and encouragement to …
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Water mass age structures the auxiliary metabolic gene content of free-living and particle-attached deep ocean viral communities
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Expanding Virophage Diversity
… approaches. By mining more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) data suite—which includes  IMG/VR (for Virus)—for the … sequences.  Further analysis led to the identification of 328 “high quality” (based on completeness) diverse new …
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Natural Prodcast Episode 8: Eric Schmidt
… end, we took an approach that was kind of a simplified metagenome sequencing approach to pick this system apart.  … ended up doing was pursuing with Jacques Ravel, at TIGR, metagenome sequencing, which was very early days for that …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding of Antarctic biogeography. … genomic variation in haloarchaea, they also characterized metagenomes (collections of partial genomes) from six … through JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) platform. These data allowed researchers to define a …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… 20 UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, … 20 UC Merced students have contributed to the research of 13 JGI scientists, and a few of the mentors shared their … and hard work have carried it through the difficult early stages, so I can begin biological analysis of the data sooner …
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Genome Sequence of the Mesophilic Thermotogales Bacterium Mesotoga prima MesG1.Ag.4.2 Reveals the Largest Thermotogales Genome To Date
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An Automated Tool for Assessing Virus Data Quality
… recovered and identified from environmental samples (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … viruses (from environmental metagenome samples) from IMG/VR , a database that is part of the Integrated Microbial …
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Natural Prodcast Episode 19: Bill Fenical
… we want to talk a little bit about. It’s sort of early stages. But I think that is emblematic of some of the … underwater. But thankfully that worked out. And I spent 30, 40 years diving all over the world and bringing samples … chemistry. And I’ve studied microbiology for about 25, 30 years. And I can actually go give a talk at ASM [The …
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Comparative proteomic profiles of the marine cyanobacterium Trichodesmium erythraeum IMS101 under different nitrogen regimes
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