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Leo Baumgart
… joined the DOE Joint Genome Institute in 2018, following his doctoral research in synthetic biology and … pipelines to transition bench-scale methods into production workflows. He developed and scaled the … plant tissues. Dr. Baumgart focuses on expanding functional genomics capabilities through process automation and method …
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The fungus that made itself at home
… for conversion to sustainable, alternative biofuels and bioproducts. This study lends insights on how the fungus has … scientists and including researchers at the Joint Genome Institute, a DOE Office of Science User Facility, compared … conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science of the U.S. …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… of these talks below, starting with Ari Patrinos. The Genomics Arms Race Ari Patrinos , Former Director of DOE’s … his colleagues were able to convince the DOE and National Institute of Health that this effort would prove invaluable. … the human genome.  By 2000, a drafted human genome was produced by a joint effort between public and private sectors …
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Substrate-Specific Differential Gene Expression and RNA Editing in the Brown Rot Fungus Fomitopsis pinicola
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The Transcription Factor Roc1 Is a Key Regulator of Cellulose Degradation in the Wood-Decaying Mushroom Schizophyllum commune
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility … knowledge. In a study published November 11, 2022, in Cell Genomics , the team focused on Actinobacteria ( … biofuels ), enhance plant health, cause diseases, and produce antibiotics. Still, the team estimates that genomic …
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A Grass Model to Help Improve Giant Miscanthus
… giant miscanthus often appear in discussions of rapidly growing plants whose biomass can be renewably converted into … literally towers over most researchers due to its prodigious capability for growth. While many desirable … Center, along with researchers from the Energy Biosciences Institute, the DOE Joint Genome Institute (JGI), a DOE …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… flagship internship program between the DOE Joint Genome Institute (JGI) and University of California (UC), Merced. … alumni, and other staff gathered at the Integrative Genomics Building, the JGI’s home at Berkeley Lab, as … they can deliver these programs to our students.”   Following this, several internship program committee members …
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Refining the Process of Identifying Algae Biotechnology Candidates
… to summary above^ as well ] The Science The recipe for growing algae as a source of sustainable biofuels seems fairly … grow, and then harvest for use as biofuels and other bioproducts. As any good cook knows, recipes can be refined for … growing them under conditions that simulated summer in Arizona. Scenedesmus  sp. NREL 46B-D3, which thrives both in …
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A Collaboration to Improve Plant Genome Annotations Across Species
… broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the HudsonAlpha … resource like this important to the field of plant genetics/genomics? Avinash: Having a better handle on the gene … species is beyond the capacity of a single lab. Growing different species poses significant challenges, as …
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Mapping the Earth’s Hidden Fungal Kingdom
… Leveraging massive comparative genomics to decode millions of mystery genes and lay a … with the Department of Energy (DOE) Joint Genome Institute (JGI)’s Fungal and Algal Science Program and JGI … opportunity early, developing standardized workflows to produce high-quality, comparable genome assemblies across …
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Statement on the Use of Genomics Data
… Institute (JGI) is committed to advancing the field of genomics through open access to resources and promoting data … Sequence Database Collaboration (INSDC) has managed the growing corpus of sequence data for all organisms as a public … a better understanding of how changes may affect data-producing users and other users. After the RFI closes on …
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