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Structure determination of the HgcAB complex using metagenome sequence data: insights into microbial mercury methylation
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Global Archaeal Diversity Revealed Through Massive Data Integration: Uncovering Just Tip of Iceberg
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Shotgun metagenome data of a defined mock community using Oxford Nanopore, PacBio and Illumina technologies
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Fungal & Algal Program
… sampling of fungi, laboratory analysis and genomics data exploration. … The Mycocosm web portal provides data access, visualization, and analysis tools for … of algae, while also encouraging community engagement and data exchange. … Mycocosm … Phycocosm … Fungal & Algal …
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Frequently Asked Questions: Project Management
… then be used to submit proposals, sample and project metadata, and to access JGI tools and systems. … Go to the “ … The Project Overview report includes project-level metadata such as the project name, current status, NCBI & JGI taxonomy, and data locations on the various JGI Portals. The Sample report …
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MISIP: a data standard for the reuse and reproducibility of any stable isotope probing-derived nucleic acid sequence and experiment
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Socotra Island the forgotten fragment of Gondwana: Unmasking chameleon lizard history with complete mitochondrial genomic data
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Simon Roux
… host(s), collaboration with JGI users for analyzing viral datasets, and the organization of community-building efforts … Biology, Université Blaise Pascal, France … Neri et al., 2023. Expansion of the global RNA virome reveals diverse … Roux et al., 2023. iPHoP: An integrated machine learning framework to maximize host prediction for metagenome-derived …
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Examining the cause of high inbreeding depression: analysis of whole‐genome sequence data in 28 selfed progeny of Eucalyptus grandis
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Whole-Genome rVISTA: a tool to determine enrichment of transcription factor binding sites in gene promoters from transcriptomic data
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MIxS-HCR: a MIxS extension defining a minimal information standard for sequence data from environments pertaining to hydrocarbon resources
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2025 NeLLi Symposium
Dartmouth University … Metagenomic and single-cell sequence data have provided a means to access novel microbial … approaches to assign functional “read out” to sequence data. Moving from cataloging microbial diversity to … , Functional Annotation Lead Steven Ahrendt , Biosystems Data Science … Brian Hedlund , University of Nevada, Las …
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