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Cataloging the Microbes that Manage the Health of River Systems
States. They also provided multiple access points to the information. The team harnessed a community-science program to … available, river-focused microbial resource that provides information at multiple scales from genes to the community … in turn affecting environmental and human health, energy production and agriculture. Understanding the compositions …
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Genomic Potential of Marinobacter aquaeolei, a Biogeochemical “Opportunitroph”
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Computationally Classifying Fungal Lifestyles
… known to infect most major food crops and feedstocks for biomass and biofuel production. Learning about the ecology and evolution of  …
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New voyages to explore the natural product galaxy
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Editorial: Cell Free Biocatalysis for the Production of Bioproducts
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Community Science Program
… sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  … fall under the umbrella of our CSP: The Large Scale call is for expansive projects that leverage a range of JGI … more customized analysis, the JGI also participates in publication of results. See more details on our Review …
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Picking Up Threads of Cotton Genomics
… , both faculty investigators at the HudsonAlpha Institute for Biotechnology. “The goal has been for all this new … disciplines that relate directly and indirectly to genetic diversity, evolution, wild germplasm utilization and … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent … carbon cycle, and are of significant interest for their potential contributions to a sustainable bioeconomy, … hot springs, an extreme environment with low genetic diversity that would help narrow down potential sources of …
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A Plant Root Atlas for Tracking Developmental Trajectories
… nearly 100,000 single root cells and combining the information with previously published datasets. The work was  … of single-cell datasets in plants and provides a foundation for still larger efforts in diverse plant species beyond … with resulting reports and a  perspective article . Publication: Shahan R et al.  A single cell Arabidopsis root …
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FICUS-NERSC/KBASE
… discovery at the DOE Office of Science through high performance computing (HPC) and data analysis.  The DOE Systems … collaborations, the DOE JGI, NERSC and KBase issued a call for proposals in biological data science as part of the … more customized analysis, the JGI also participates in publication of results. … Submission … More on Sequencing …
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Microbial Diversity for Biotechnology
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Characterization of the Clostridium thermocellum AdhE, NfnAB, ferredoxin and Pfor proteins for their ability to support high titer ethanol production in Thermoanaerobacterium saccharolyticum
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