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Development of an integrated transcript sequence database and a gene expression atlas for gene discovery and analysis in switchgrass (Panicum virgatum L.)
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Webinar: MycoCosm Tutorial
… While are still working on finalizing the tree and related publication the tree is still in development and not … (are these functional annotations) and how are these integrated within the platform? A: Please contact the … on the portal. PFAM are assigned using interproscan. Transcription factors are a subset of the PFAMs known to be …
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Comparative genomic reconstruction of transcriptional networks controlling central metabolism in the Shewanella genus
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Expression in poplar of dehydroshikimate dehydratase induces transcriptional and metabolic changes in the phenylpropanoid pathway
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Meeting Code of Conduct
… entire event. All participants are expected to be familiar with this policy. Our aim in hosting an event is to build a …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… with Cappable-seq, a technique that precisely maps where transcription begins on the genome. This revealed a sweeping … a drastic metabolic shift. The net effect is coordinated upregulation of energy production, biosynthetic precursor … or related microbes can work with the JGI to apply the same integrated approach to unlock useful chemistry in their …
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Toward a Standards-Compliant Genomic and Metagenomic Publication Record
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A roadmap for equitable reuse of public microbiome data
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Metabolomics
… mass spectrometry (LC-MS) based methods in combination with advanced computational analysis.   Overview of …
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Identification of a gene encoding the last step of the L-rhamnose catabolic pathway in Aspergillus niger revealed the inducer of the pathway regulator
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SECONDARY WALL ASSOCIATED MYB1 is a positive regulator of secondary cell wall thickening in Brachypodium distachyon and is not found in the Brassicaceae
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Endogenous short RNAs generated by Dicer 2 and RNA-dependent RNA polymerase 1 regulate mRNAs in the basal fungus Mucor circinelloides
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