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Novel Approaches Toward Scalable Composable Workflows in Hyper-Heterogeneous Computing Environments
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NMPFamsDB: a database of novel protein families from microbial metagenomes and metatranscriptomes
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Phylogenomic Analyses of Non-Dikarya Fungi Supports Horizontal Gene Transfer Driving Diversification of Secondary Metabolism in the Amphibian Gastrointestinal Symbiont, Basidiobolus
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Massive lateral transfer of genes encoding plant cell wall-degrading enzymes to the mycoparasitic fungus Trichoderma from its plant-associated hosts
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last … Nikos Kyrpides, Natalia Ivanova and Simon Roux, along with data from a consortium that included Susannah Tringe … Woyke, were all instrumental in the development of the Novel Metagenome Protein Families (NMPF) Catalog . Published …
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Nikos Kyrpides
… Inc. in Chicago, IL. He did his postdoctoral studies with Carl Woese at the University of Illinois at … Dr. Kyrpides’ research focus on Microbiome Research with an emphasis on Microbiome Data Science. His group is developing novel methods for enabling large-scale comparative analysis, …
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… biological sequences such as biosynthetic gene cluster structures. Zhong Wang, a computational biologist at … language of biology — and primed for integration with artificial intelligence tools.  LLMs aren’t just for … meaning and relevance of new sequences. It can generate novel sequences based on the principles it learns from the …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last … decade” by Clarivate Analytics. Those from the JGI whose publications rank in the top 1% by citations for field and … published in  Nucleic Acids Research .  ID’ing RNA viruses with ease : Searching for RNA sequences within a database …
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Insights into the metabolism, lifestyle and putative evolutionary history of the novel archaeal phylum ‘Diapherotrites’
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Characterization of a Planctomycetal Organelle: a Novel Bacterial Microcompartment for the Aerobic Degradation of Plant Saccharides
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