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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and … different organizations is discoverable and accessible. Linking the resources of powerful institutions like the JGI, … (ESNet), the JGI has unique access to both expertise and infrastructure to facilitate these efforts. Particular areas …
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Data shopping in an open marketplace: Introducing the Ontogrator web application for marking up data using ontologies and browsing using facets
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Four Researchers Join JGI User Executive Committee
… have been elected to the User Executive Committee of the Joint Genome Institute, a Department of Energy user facility … those found in association with both domesticated and wild animal and plant hosts. One main focus of his service … service on the UEC and we thank them for their advice. Christopher Schadt stepped into the UEC chair role effective …
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Taxonomic and Functional Diversity of a Quercus pyrenaica Willd. Rhizospheric Microbiome in the Mediterranean Mountains
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Microbial colonization and persistence in deep fractured shales is guided by metabolic exchanges and viral predation
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Viruses control dominant bacteria colonizing the terrestrial deep biosphere after hydraulic fracturing
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Horizontal gene transfer and gene dosage drives adaptation to wood colonization in a tree pathogen
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Silver age of GOLD introduces new features
… The JGI’s Genomes OnLine Database celebrates 25 years as a vital resource for data contextualization The Science Since its launch 25 years ago, the  Genomes OnLine Database … a broad range of activities from proposal intake to publication. Information is also obtained and cross-checked …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development of novel computational tools to … B.S. in Microbiology, Université Blaise Pascal, France M.S. in Data Analysis and Modeling for Life Sciences, Université …
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Rex Malmstrom
… and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ … Ph.D. in Marine Biology/Biochemistry, University of Delaware BA in … quantitative analysis strategy for stable isotope probing metagenomics. mSystems 8:e01280-22. Volland et al. 2022. …
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Isolation of Histone from Sorghum Leaf Tissue for Top Down Mass Spectrometry Profiling of Potential Epigenetic Markers.
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… By characterizing the structure and function of a methylthio-alkane … reductase system, researchers could open avenues for using bacteria to produce ethylene and more.  Microbes excel at recycling the abundant miscellanea of their surroundings. Case in … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User …
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