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Ancient polymorphisms contribute to genome-wide variation by long-term balancing selection and divergent sorting in Boechera stricta
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
Team develops a computational pipeline to sift and … in various shades of white. To researchers searching for sequences of RNA viruses in large data sets, their work … scan for those snowflakes, or RNA virus sequences. Using this workflow, the team combed through more than 5,000 …
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Katherine Louie
… to develop the metabolomics program, and in 2019 became Platform Lead where she manages metabolomics production for community sequencing projects and heads R&D … Sci Rep. 2013;3: 1656. … Education … Selected Publications …
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Enlarging Windows into Understanding Gene Functions
… array of combinations, are unremarkable, save perhaps for the absence of all the other letters of the alphabet. … TFs and regulatory networks are conserved across fungi.” Using multiDAP-seq, Nagy’s team is comparing five fungal … materials, which could be useful for industrial biofuel production, and multicellular development. “DAP-Seq is the …
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Danielle Goudeau
Danielle operates the single-cell genomics pipeline for JGI … This work combines custom flow cytometric analysis, cell sorting, genome amplification, PCR screening, and 16S …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
Though visible to the naked eye, microscopy reveals unexpected complexity At first … National Laboratory (Berkeley Lab) and the Laboratory for Research in Complex Systems (LRC) in Menlo Park, Calif. … in three dimensions and at relatively high magnification. Using various microscopy techniques, such as hard x-ray …
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Extensive Genome-Wide Phylogenetic Discordance Is Due to Incomplete Lineage Sorting and Not Ongoing Introgression in a Rapidly Radiated Bryophyte Genus
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Nigel Mouncey
… genetics that started with his education and carried forward into his roles as a senior research scientist at … the discovery, development and commercialization of novel production organisms and fermentation processes for … World Bio Markets Bio-based Business Person of the Year Publications Committee Chair (2016- ), Society for …
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Olpidium, The Key to the Origin of Terrestrial Fungi
Before 2006, Olpidium was one of the many obscure fungi of … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … were then sent to the JGI for whole genome sequencing using the Illumina platform. Unfortunately, both the DNA and …
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Thermoacidophilic proteins for biofuel production
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Ochratoxin A production by Penicillium thymicola
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Doubling Down on Known Protein Families
Using a novel computational approach, researchers confirm … unique makeup of microbe players and the functions they perform, artificially replicating a whole community is …
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