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Tracking heavy water (D2O) incorporation for identifying and sorting active microbial cells
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Advancements in the application of NanoSIMS and Raman microspectroscopy to investigate the activity of microbial cells in soils
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Root cap cell corpse clearance limits microbial colonization in Arabidopsis thaliana
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Microbial dark matter ecogenomics reveals complex synergistic networks in a methanogenic bioreactor
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Widespread natural variation of DNA methylation within angiosperms
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Diversity of active viral infections within the Sphagnum microbiome
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal … — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species decompose … Overall, they found that despite vast species diversity, each guild carried out remarkably similar functions across …
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Identifying the Microbial Cleanup Crew at a Superfund Site
Analysis reveals the microbial community involved in a bioremediation effort. The … found its way into the groundwater of several communities in New Mexico via leakage from a local … break down PCE into the chemical compound ethene. Applying genome sequencing and analysis, the researchers identified …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … to environmental stresses or mediate interactions with each other (sometimes antagonistic ones, via antimicrobials) … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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Complementary Metagenomic Approaches Improve Reconstruction of Microbial Diversity in a Forest Soil
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… oak woodlands from the air, large swaths of the bleached, skeletal remains of trees can be seen. These plagued … trace its origins, the researchers engaged the DOE Joint Genome Institute (JGI), with support of the US Department of … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a …
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Biases in genome reconstruction from metagenomic data
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