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Annotation of the Corymbia terpene synthase gene family shows broad conservation but dynamic evolution of physical clusters relative to Eucalyptus
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Enabling pan-repository reanalysis for big data science of public metabolomics data
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… Kaushal Sharma, one of five Antioch High School rising juniors who participated … program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates … in GOLD. “Besides these, he curated several small sets of phylogeny, biosample metadata tasks we assigned.”   …
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Picking Up Threads of Cotton Genomics
… growing on plants, with fluffy white bolls bursting out of the green pods in every direction. There are 100 million … that relate directly and indirectly to genetic diversity, evolution, wild germplasm utilization and increasing the … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …
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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… Streamlined genome with precise gene targeting transforms oil-producing alga into a powerful …   The Science Scientists have fully decoded the genome of an oil-producing green alga, and demonstrated precise … be deleted opens new engineering possibilities. The rapid evolution observed suggests directed evolution could quickly …
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Ian Blaby
… Since 2019 Dr. Blaby heads the Biodesign Platform at the … National Laboratory where he focused on functional genomics of phototrophs. Through this and post-doctoral positions at University of Florida and UCLA he has worked with a wide range of … view to developing a deeper understanding of sequence-based gene function. …
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Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and … (polyploidy) and insights into the dynamics of gene expression as it grows back vigorously year after year … models, Miscanthus has a large and complex genome whose evolutionary history and perennial lifecycle makes it …
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How To Use Our Systems
… One of the JGI’s key assets is our user community, comprising a broad range of … have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data … Looking for BBTools? Find it here.  …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… Choice Awards . NERSC, JGI, ESnet are U.S. Department of Energy Office of Science user facilities. The HPCwire … results this year by assembling a collection of large datasets that will enable scientists to explore and collect data … first time with  MetaHipMer , taking advantage of scalable parallel algorithms and GPU acceleration, and we’re …
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