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Standardized naming of microbiome samples in Genomes OnLine Database.
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… all fungi, and found that some of these genes have moved from the mitochondria into the nuclear genome over … twice the size of the largest fungal mitochondrial genome reported before this study. A statistical comparison of … search environmental data, they developed a two-stage metagenomic detection pipeline: First, they scanned over 26,000 …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… Congratulations to the  2022 Highly Cited Researchers from the JGI recognized for their “significant influence in their chosen field or fields through the publication of multiple highly cited papers during the last … as other year-end science discovery lists.  Updates to the Genomic Encyclopedia of Bacteria and Archaea : Under the …
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Accessibility/Section 508 Statement
… individuals with disabilities in accordance with Section 508 of the Rehabilitation Act (29 U.S.C. 794d), as amended in 1998.   Send feedback or concerns related to the accessibility of this website to DOE Section 508 Coordinator mailbox.   For more information about Section …
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Proteogenomic Analysis of a Thermophilic Bacterial Consortium Adapted to Deconstruct Switchgrass
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Help from Citrus’ Bitter, Hardier Cousin
… that could prove fruitful for saving Citrus from greening disease. You’ve probably never heard of … resists a disease ravaging citrus groves: citrus greening. From 2012 to 2016, in Florida alone this disease caused an … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Operating Expenses
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Katherine Louie
… techniques, the platform delivers rich metabolite profiles from diverse biological and environmental samples in support … large metabolite databases by running 1000s of metabolite standards, and development of high-throughput untargeted … and custom software for integrating metabolomics with genomic data (MAGI) for functional annotation and …
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Improving the Cacao Genome and Phytozome
… (ICCO), global cocoa bean production in 2017-2018  was 4.6 million metric tons . The global chocolate brands … produces cacao beans – was released by a Mars, Inc.-led consortium through the Cacao Genome Database project. The … by HudsonAlpha scientists, with the help of funding from Mars Wrigley. The annotated genome has been updated to …
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A call for standardized classification of metagenome projects
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… photosynthesizing organisms called phytoplankton (from the Greek phyto for ‘plant’ and planktos for … waters that have an average surface temperature of about 58° Fahrenheit (14° Celsius) — a cool intermediate to the … Panel on Climate Change (IPCC) 5th Assessment Report to predict where and how fast the 14° Celsius …
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Uncovering Novel Genomes from Earth’s Microbiomes
… repository of 52,515 microbial draft genomes generated from environmental samples around the world, expanding the … and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the study of the microbial communities in the … these researchers to be co-authors as part of IMG data consortium,” she said. Listen to study co-author Dan Udwary …
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