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The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions
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The Genomes OnLine Database (GOLD) v.4: status of genomic and metagenomic projects and their associated metadata
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The YNP Metagenome Project: Environmental Parameters Responsible for Microbial Distribution in the Yellowstone Geothermal Ecosystem
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The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata
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The Genomes On Line Database (GOLD) in 2007: status of genomic and metagenomic projects and their associated metadata
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A genomic analysis of the archaeal system Ignicoccus hospitalis-Nanoarchaeum equitans
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Comparative Metagenomic and Metatranscriptomic Analysis of Hindgut Paunch Microbiota in Wood- and Dung-Feeding Higher Termites
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DAS Tool for Genome Reconstruction from Metagenomes
… Developing and validating an integrated approach to genome recovery from metagenomes. The Science Through the JGI’s Emerging … individual contributions, is key to understanding their ecosystem functions in processes ranging from nutrient cycling … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the …
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Functional and genetic markers of niche partitioning among enigmatic members of the human oral microbiome
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Natural Prodcast Episode 21: Elizabeth Parkinson
… DAN: All right. Welcome back to Natural Prodcast. I did it. … can turn on the natural product, say clusters or expression systems so that-- BETSY PARKINSON: Exactly. DAN: --you get … unknown. And so we've done the sequence similallity network analysis where we look for other receptors with sequence …
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Dan Rokhsar
… Dr. Rokhsar joined the JGI in 2000 as the founding Associate Director … efforts directed towards the sequencing, annotation, and analysis of three human chromosomes. After successful … genome analysis, sequence-based genetic methods, and comparative developmental biology. In addition to this …
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An Automated Tool for Assessing Virus Data Quality
… CheckV can help researchers assess virus sequence fragments and data … being recovered and identified from environmental samples (metagenomes). However, the quality and completeness of … functional assessment, host prediction, and phylogenetic analysis. The development of CheckV helps researchers to …
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