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… Data Science group led by Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense collection of publicly accessible … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …

… Open Green Genomes hits milestone with C. richardii The Science Fern … in the land plant tree of life. Ultimately, the resulting comparative framework can inform the efficient production of … to its gene hoarding and those long genes. And gene family analysis showed that genes directing development of …

… The class was also able to receive training for the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) portal for their sample analysis.  The class had to … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …

… JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), the latest release of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates …

… National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of California, Berkeley. He … to the Human Genome Project and led annotation and analysis of diverse eukaryotic genomes, from protists to plants. In 2009, he launched the …

… scientific contributions—including sequencing services and analysis—to participants. Over the past two years, Myco-Ed … (JGI), a DOE Office of Science User Facility, and the DOE Systems Biology Knowledgebase (KBase). The JGI and KBase are … genomics. Fungi can be better understood through reference genomes, but unfortunately there are not many available to …

… the genomes of these viruses and associate them with their microbial hosts. However, assembling viral genomes from … an incomplete picture of a virus, and for viruses that have integrated into the host genome, these sequences may be … viruses (from environmental metagenome samples) from IMG/VR , a database that is part of the Integrated Microbial …