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Genomic Mysteries of Giant Bacteria: Insights and Implications
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Insights into the metabolism, lifestyle and putative evolutionary history of the novel archaeal phylum ‘Diapherotrites’
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Hydrogenotrophic methanogenesis in archaeal phylum Verstraetearchaeota reveals the shared ancestry of all methanogens
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Taking Stock of the Known and Unknown Microbial Space
… Metagenomic datasets could help map out microbial diversity … in sequencing technologies have led to an abundance of microbial genomes becoming available to the global research community.  Published January 17, 2025 in Science Advances , researchers at the U.S. …
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An Integrated Dataset to Understand Ecosystem Interaction
… data set will help identify how different elements of the ecosystem interact and respond to changes in the … approach allows researchers to conduct a wide variety of analyses that contribute to a sustainable bioeconomy. … managed through human intervention. By leveraging metagenomics, scientists were able to analyze the DNA of …
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An Addiction Crucial to a Fungus’ Reproduction
… A fungus relies on bacteria to regulate key components of its reproductive machinery The Science To better … occurs. Rhizopus is a fungal pathogen of crops, including candidate bioenergy feedstocks sunflower, and maize, and a … JGI team sequenced and annotated a host genome (Rm ATCC 52813) as part of the 1000 Fungal Genomes project. As …
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Metatranscriptomics sheds light on the links between the functional traits of fungal guilds and ecological processes in forest soil ecosystems
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Effects of Polar Light Cycle on Microbial Food Web
… Populations of Antarctic lake microbial communities change with the seasons. The Science Light-harvesting bacteria (phototrophs) in Antarctica’s Ace Lake defy the … collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published in  …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … fungal metatranscriptome yet,” said Igor Grigoriev, Fungal Genomics Program Head at the JGI.  Along with an improved … the soil below a pine or an oak tree, in Sweden or Quebec.  Ecologically, Martin suggests this redundancy is protective, …
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Absence of genome reduction in diverse, facultative endohyphal bacteria
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… hydroxyapatite, a high-value biomaterial with a wide range of industrial applications. The team was led by researchers … highlights an  ongoing partnership that combines the JGI’s genomic capabilities with the Foundry’s nanoscale materials … an osteoyeast. Foundry researchers then performed imaging analyses, using several microscopy techniques to confirm …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… — making it difficult to grasp a deeper understanding of fundamental aspects of fern biology and, more broadly, … and associated methylome, transcriptome and metabolome analyses for C-fern that was able to shed some light on the … of novel genetic material with applications including ecological remediation and bioprospecting — paving the way …
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