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… data portal , an interactive collection of sequenced algal genomes, omics data and comparative analysis tools. … sets the trees are based upon? A: This is still work in progress as new genomes are being added. We do plan to publish the tree or … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… are abundant and yet exceptionally small, with mini genomes to match. As a result, they cannot process all of … microorganisms had a close relationship. Then, using metagenomes and metatranscriptomes generated by the U.S. … these two organisms suggested new possibilities beyond the current understanding that CRISPR-Cas systems target …

… of a plant host’s susceptibility to pathogens. Dr. Vogel’s current research is focused on developing plant functional … techniques) and utilizing these resources to understand genome organization and regulation, abiotic stress … the evolutionary and practical significance of plant pan-genomes including understanding polyploid genome evolution …

… Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds … National Laboratory. The JGI sequenced over 1,000 metagenomes and established standardized sequencing protocols so … collected at each sampling site, were compiled into the Genome Resolved Open Watershed database (GROWdb). The team …

… Genome annotations of two C. citriodora subspecies broaden … will be important for alternative fuel development in the future. Summary Though the closely-related Eucalyptus and … Facility, revealed the largest number of TPS genes of any currently sequenced plant, a number closely followed by E. …

… researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … enriching the work being done as part of the 1000 Fungal Genomes Project. Funding for the project was also provided … US Department of Energy Contract DE-AC02-05CH11231, a Joint Genome Institute Community Science Program grant (CSP 982), …

… of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … Miscanthus sinensis has been published. Analysis of the genome sequence also provides insights into how the multiple … environments such as poor soils and drought. The reference genome for M. sinensis, and the associated genomic tools, …

… Phytozome will be retired, and  version 13 will become the current, and only, version of Phytozome accessible as an … website. Since May 2019, v12 has not had any additional genomes added to it, nor had any feature updates. Phytozome  v13, which now hosts upwards of 250 plant genomes and has been under active development for over 5 …

… Streamlined genome with precise gene targeting transforms oil-producing … products.    The Science Scientists have fully decoded the genome of an oil-producing green alga, and demonstrated precise gene targeting in the genome in the November 2025 issue of The Plant Cell. …

… genomics to decode millions of mystery genes and lay a future-ready foundation     Over the past billion years, … Researchers with the Department of Energy (DOE) Joint Genome Institute (JGI)’s Fungal and Algal Science Program … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations …