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… from Lawrence Berkeley National Laboratory (Berkeley Lab) and other institutions shared their works-in-progress with … an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing data gathered … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …

Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics … flows, and evolved into scalable methods for scientific data analysis. In 2014 Dr. Fagnan became the JGI-NERSC … … About the JGI Chief Informatics Officer … Selected Publications … Awards and Honors …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — … on Phytozome  … Filling in the Plant Tree of Life … Fungal Dataset … Plant Datasets … Genome Insider …

Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the “chytrids”).  A … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … data were generated, bioinformatic tools for binning metagenome data involved with mainly eukaryotic origins were …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a … large-scale “citizen science” project to generate real-time data for modeling and predicting the spread of a plant …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … it, viruses are most likely in your system and in your data, and they’re probably influencing the microbes there,” … culture. Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. …