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10 From JGI on the 2019 Highly Cited Researchers List
Clarivate Analytics, formerly the IP & Science arm of Thomson Reuters, has … Lead Dan Rokhsar, Molecular Biology & Genetics Staff Data Scientist Asaf Salamov, Plant & Animal Science category … Nature Genetics, the work is part of a long-term project to sequence, annotate and analyze the genomes of more than 300 …
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JGI Workshop at SIMB NP Meeting
… often tedious and resource intensive. This is often due to, for example, tight regulation of biosynthetic gene clusters … expressing a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict … available genome sequences. The DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, has been …
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Programs & Platform Leads
As an Integrative Genome Science User Facility, the JGI plays a leadership role in enabling the frontiers of … draw from the infrastructure of Genomic Technologies and Data Science & Informatics. The JGI also sustains a vibrant community …
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Protein structure determination using metagenome sequence data
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BioPig: a Hadoop-based analytic toolkit for large-scale sequence data
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JGI Earth Month: Wetlands Work in #TenHundredWords
DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that … living on a changing planet. Mo Kaze is a University of California (UC), Merced graduate student working with  Susannah … Community Structure and Methane Production in California’s Canal System,” focuses on anthropogenic impacts on …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… the ability to break down hardy plant cell walls and therefore hold clues to how humans could do the same on an … that can’t be cultured by analyzing and then extrapolating data obtained from environmental samples — to identify over … of rumen-digested switchgrass, researchers isolated and sequenced DNA from rumen microbes involved in the digestion …
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Exploring Phages at JGI
… of working at a national laboratory. However, through the JGI-UC Merced internship program, I was able to collaborate …
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Plant-Microbial Interactions Group
… experimental characterization methods, in addition to bioinformatics tools to elucidate phage function in this … atlas comprising Sorghum, Switchgrass, and Brachypodium datasets. We recently profiled the association between the … 10.1371/journal.pbio.2002860 … Postdocs: Margot Bezrutczyk (JGI Postdoc) Lamprinos Frantzeskakis (JGI Postdoc) Interns: …
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DOE JGI Interns Share Their Summer Experiences
This summer, the DOE JGI hosted 10 interns who came from a wide range of … Many of them spent the summer crunching genomic data at a computer; a few had the opportunity to spend time … analyses at their desks. As part of the DOE JGI’s efforts to promote diversity and inclusion in the sciences, …
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Events
…  Learn about meetings the JGI is hosting:   … New Lineages of Life (NeLLi) … Viral EcoGenomics & Applications (VEGA)  …   The JGI is represented at conferences year round; find out where …
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Microfabrication of a Chamber for High-Resolution, In Situ Imaging of the Whole Root for Plant–Microbe Interactions
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