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Four Researchers Join JGI User Executive Committee
… Four researchers have been elected to the User Executive … Bik is a recipient of the Community Science Program (CSP) New Investigator call. Through membership in the UEC, … Program over the past decade in gene regulatory network projects supported by the CSP, and as part of microbiome …
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Building Sphagnum Genomic Resources
… The Science Enabled by the JGI’s Community Science Program (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system focused … magellanicum genome is currently being assembled. These resources would provide the research community with the ability …
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An Integrated Dataset to Understand Ecosystem Interaction
… trees. The data set generated is 25 terabytes in size. Resources for genomic sequencing, analysis and characterization … able to conduct a wide variety of analyses that can enhance our understanding of plant-microbe interactions — with … From our partners …
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Graduate Students Get Thesis Research Opportunity at the JGI
… between 3-12 consecutive months. Their proposed research projects address scientific challenges central to Office of … are developing cutting edge technologies to answer our most pressing problems. I’m very much looking forward to … samples across spatial and temporal scales. Rambo also plans to work with JGI virus researchers and harness the …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… revisiting a number of notable achievements that showcase our collaborations and capabilities to enable great science … poop.  “As an engineer, I think of poop as a biotech resource,” O’Malley said as she opened her talk at the  2022 … into biochemical production.    Over time, as these projects have delivered results, they have also snowballed …
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Webinar: SIP technologies at EMSL and JGI
… separation to library sequencing and assembly. Like others, our turnaround time has been impacted by the pandemic. 3. Q: … collection. 4. Q: Are there existing narratives, or plans to develop narratives in KBase for SIP studies? I’d be … for the label in the plant, it could be as short as 24 hours.  If you’re looking at the deposition into the …
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The Physcomitrella patens gene atlas project: large‐scale RNA‐seq based expression data
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DAS Tool for Genome Reconstruction from Metagenomes
… the JGI’s Emerging Technologies Opportunity Program (ETOP) , researchers have developed and improved upon a tool … from environmental samples. The work aligns with the ETOP mission of providing JGI users with the most current … Tool is an example of how JGI users can benefit from the ETOP program, as tools such as this can help advance …
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How Maize Makes An Antibiotic Cocktail
… buck. The research team reports that transferring just four genes encoding these enzymes to another plant, such as  … in  Nature Plants that the zealexin pathway has an “hourglass” shape with diverse precursors in, and many … Science Program . And the work is part of a  larger CSP Functional Genomics proposal to understand terpene  …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… of the  Marchantia pangenome, scientists developed a resource that associates plant’s genetic variants with specific …
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Chapter Five The Sphagnum Genome Project A New Model for Ecological and Evolutionary Genomics
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The Genomes OnLine Database (GOLD) v.4: status of genomic and metagenomic projects and their associated metadata
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