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Automated annotation of scientific texts for ML-based keyphrase extraction and validation
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Metabolomics Program
… recommend using the workflow in  GNPS2 .   … In support of user science, the JGI Metabolomics Platform delivers rich …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
A two-day kick-off meeting held at Lawrence Berkeley National Laboratory … UDE familiarized themselves with the research programs and user facilities at Berkeley Lab. Commenting on the visit, … institutions will give us the opportunity to advance unique scientific knowledge and address global challenges.”  During …
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How to Target a Microbial Needle within a Community Haystack
A workflow for capturing the genetic make-up of specific uncultivated microbes from … signal amplification provided by HCR-FISH is critical for detection. Once cells are labeled with HCR-FISH, they can be … users in order to address pressing energy and environmental scientific challenges. … The work conducted by the U.S. …
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Frameshift detection in prokaryotic genomic sequences.
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Cultivating Symbiotic Antarctic Microbes
… lifestyles found in the Antarctic lakes and offers a genetically-tractable model system that could help … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, experimentally demonstrated that … which is co-funded by the European Commission (EMBOCOFUND2012, GA-2012-600394) and supported by Marie Curie Actions. …
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2024 Progress Report
Mission  As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic capabilities, … processed 13,700 metabolomics samples With our users, 247 publications were published   … Our primary objective is to … 11% of the five-year milestones. … Highlights arising from scientific collaborations with our users over the last year …
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10 From JGI on the 2019 Highly Cited Researchers List
Genomics Lead Dan Rokhsar, Molecular Biology & Genetics Staff Data Scientist Asaf Salamov, Plant & Animal … Plant & Animal Science and Molecular Biology & Genetics categories Microbial Systems research group lead and User Programs Deputy Susannah Tringe, Cross-Field category …
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Meeting report: International soil virus conference 2024
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Disclaimer
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Nigel Mouncey
Dr. Mouncey has a long-standing interest in microbial genetics that started with his education and carried forward … The University of Glasgow … The Director provides scientific and managerial guidance for all aspects of the … World Bio Markets Bio-based Business Person of the Year Publications Committee Chair (2016- ), Society for …
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Approved Proposals
… as well as the Facilities Integrating Collaborations for User Science (FICUS) program.  …
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