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Matt Blow
Dr. Blow joined the JGI in 2009, and currently heads the User Support Analysis group. He … Sanger Institute and Cambridge University University in 2005, where he studied RNA editing and cancer genetics. Dr. … and plasticity in bacterial gene regulation. Nature methods 18 (12), 1499-1505 Shulse et al. 2019. Engineered Root …
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Streamlining Regulon Identification in Bacteria
… most recent study, only 12 sigma factors and 200 genes (or 209 sigma factor-target gene pairs) had been experimentally … of sigma factors linked to at least one target gene to 18, with the number of factor-gene pairs almost doubling to … of Energy Office of Science under Contract No. DE-AC02-05CH11231 …
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Natural Prodcast
… future developments, and how the JGI can be part of that space.   …
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Microbiome Data Science Team
… hosts (Nature 2016, Science 2017, Nature Microbiology 2018), discovery of new genes with important biotechnological … of Earth’s microbiomes. Nature Biotechnol . 39(4):499-509. Danko D. et al. (2021) A global metagenomic map of urban … from the human gut microbiome. Nature Biotechnol.  39(1):105-114. Schulz F, et al. (2020) Giant virus diversity and …
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An Integrated Dataset to Understand Ecosystem Interaction
Laboratory (Berkeley Lab). All of this information — 318 metagenomes, 98 plant transcriptomes and 314 metabolomic … LLC, for the U.S. Department of Energy under contract DE-AC05-00OR22725. The work ( … Department of Energy operated under Contract No. DE-AC02-05CH11231. The work conducted by the National Microbiome …
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Events
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… path, has previously proven successful; in the 2018-2023 five-year strategic plan, the JGI accomplished 90% …
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Introducing New Members of the JGI User Executive Committee
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… environmental or biological samples (like cell media or lake water) without doing a metabolite extraction? Or are …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
User Facility, is supported under Contract No. DE-AC02-05CH11231. JRS is supported by the NASA Astrobiology … supported by NSF grants DEB-1441717, OCE-1335810, and OIA-1826734. …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… dioxide, to make valuable chemicals, such as ethanol and acetone . To help reduce production of byproducts, the JGI …
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Making a Lichen Together
… super strength. For lichen, the partnership is more commonplace — though perhaps no less dramatic. In lichen, the … the U.S. DOE Office of Science under Contract No. DE-AC02-05CH11231. The work of MP, DL and SSM was supported by the …
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