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How to Submit Sequencing Samples
… is collected via spreadsheet or directly via a web interface prior to shipping samples to the JGI. PI sends Project …
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Frederik Schulz
J.-M. et al. 2022. A centimeter-long bacterium at the interface of simple and complex life. Science . 376: 1453-1458 … of Earth’s microbiomes. Nature Biotechnology 39, 499-509. Schulz et al. (2020) Giant virus diversity and host … binning of a giant virus. mSystems. 5 (3) Schulz et al. (2018) Hidden diversity of soil giant viruses. Nature …
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Plant Pan-Genomics Comes of Age
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… at three DOE Bioenergy Research Centers (BRCs)—the  Great Lakes Bioenergy Research Center (GLBRC) , the  Center for …
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Tour the IGB
… tours of each floor, click and drag to look around the space, use the graphic rings to move about the space, and your pointing device to zoom in and out. 1st floor …
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Matt Blow
Dr. Blow joined the JGI in 2009, and currently heads the User Support Analysis group. He … Sanger Institute and Cambridge University University in 2005, where he studied RNA editing and cancer genetics. Dr. … and plasticity in bacterial gene regulation. Nature methods 18 (12), 1499-1505 Shulse et al. 2019. Engineered Root …
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Streamlining Regulon Identification in Bacteria
… most recent study, only 12 sigma factors and 200 genes (or 209 sigma factor-target gene pairs) had been experimentally … of sigma factors linked to at least one target gene to 18, with the number of factor-gene pairs almost doubling to … of Energy Office of Science under Contract No. DE-AC02-05CH11231 …
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Natural Prodcast
… future developments, and how the JGI can be part of that space.   …
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Microbiome Data Science Team
… hosts (Nature 2016, Science 2017, Nature Microbiology 2018), discovery of new genes with important biotechnological … of Earth’s microbiomes. Nature Biotechnol . 39(4):499-509. Danko D. et al. (2021) A global metagenomic map of urban … from the human gut microbiome. Nature Biotechnol.  39(1):105-114. Schulz F, et al. (2020) Giant virus diversity and …
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An Integrated Dataset to Understand Ecosystem Interaction
Laboratory (Berkeley Lab). All of this information — 318 metagenomes, 98 plant transcriptomes and 314 metabolomic … LLC, for the U.S. Department of Energy under contract DE-AC05-00OR22725. The work ( … Department of Energy operated under Contract No. DE-AC02-05CH11231. The work conducted by the National Microbiome …
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Events
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… path, has previously proven successful; in the 2018-2023 five-year strategic plan, the JGI accomplished 90% …
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