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… is critical to energy independence in the U.S. Not only does it pair with maize, the dominant source of bioethanol, … first legume species with a published complete draft genome sequence. At the time, the vital global source of both … to the sequence’s availability via Phytozome. In 2015,  a new and revised version brought the soybean sequence up to …

Berkeley National Laboratory (Berkeley Lab). And one of the tools that researchers can apply to study the transcription … Methods paper coauthor Lee did the initial development of a streamlined workflow that reduces the time and cost … factors have been repurposed during evolution to control new functions,” O’Malley said. “Combining the two approaches …

The DOE Joint Genome Institute hosted the hybrid “NeLLi 2023 … Overview of Symposium Goals Metagenomic and single-cell sequence data have provided a means to access novel microbial lineages, leading to a new appreciation for the extent of diversity. The …

Proposals aim to sequence and annotate genomes from Antarctica to Africa to … said Susannah Tringe, JGI User Programs Deputy. “These new CSP projects accelerate our efforts to characterize … physiology is impacted by these bacteria during mating processes. Kathryn Bushley of the University of Minnesota is …

… such as  Mash and  BBsketch , whose lead developer is JGI software developer Brian Bushnell, no alignment-free tool … Resources Division (CRD), in order to create more useful tools for the bioinformatics community. Other work presented … chromosomal sequences in mixed-genome samples) with a new tool called MetaGNN (Prashant Pandey of CRD). The …

Congratulations to the 2020 Highly Cited Researchers at the JGI! They are among those recognized by Clarivate Analytics … that  released a very high quality reference genome sequence of green millet ( Setaria viridis ) in  Nature …   … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …

… yeasts and algae previously with little to no genetic tools enabling heterologous expression and functional … additional phase of user-accessible project types, in which DNA-based molecules can be chromosomally integrated into a …

… ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI researchers and … Generating these datasets opens up the possibility of new insights across ecosystems and research teams. Even … genome-resolved metagenomes and will be implementing new tools in KBase to tackle the bioinformatic challenges …

… and Roux also worked together on the development of a new software tool called geNomad that identifies and classifies … elements based upon their gene content and their genetic sequences. Roux was first author on a study featuring a new …

Advances in sequencing technologies and computational tools have uncovered a diversity of viruses that infect not … While most organism’s genetic information is encoded in DNA, with RNA delivering the instructions inside DNA to the … higher-level classifications of virus groups (phyla.) The new sequences are filling in some gaps on existing virus …

Genome Institute has continued its journey to realize our new vision to, “ Lead genomic innovation for a sustainable … 39,870 projects in FY24 We generated 871 Terabases of sequence We synthesized 9.7 Megabases of DNA We processed 13,700 metabolomics samples With our users, …