Results

An expanded evaluation of protein function prediction methods shows an improvement in accuracy
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Cross-species functional diversity within the PIN auxin efflux protein family
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metagRoot: a comprehensive database of protein families associated with plant root microbiomes
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… team was investigating. So, to be able to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) … roots). The team collected samples from these habitats. The proteins in the samples were then isolated and sequenced by …
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JGI Workshops at PAG
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DOE JGI Metagenome Workflow
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Fungal genomes mining to discover novel sterol esterases and lipases as catalysts
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Mixotrophic Iron-Oxidizing Thiomonas Isolates from an Acid Mine Drainage-Affected Creek.
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Expanding Virophage Diversity
… share only four genes in common: major and minor capsid proteins (MCP and mCP, respectively), ATPase involved in DNA … sequences 10-fold through computational approaches. By mining more than 14,000 publicly available metagenomic …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… In this short video, UC Merced undergraduate and graduate students share … Juan C. Villada Natalie Meacham and mentor G. Albert Wu Video Transcript: Yumary Vasquez : So this summer what I …
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Engineering Bacterial Microcompartment Shells: Chimeric Shell Proteins and Chimeric Carboxysome Shells
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Isolation and Characterization of the Prochlorococcus Carboxysome Reveal the Presence of the Novel Shell Protein CsoS1D
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