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… compounds are biosynthesized and their roles in the environment, can unlock new avenues for bio-based products and … compounds are key to organisms' interactions with their environments and with each other, from defending against … metabolite synthesis. We are currently exploring  Escherichia coli and  Streptomyces lysate systems. Deciphering …

… that allow the organisms to adapt to and control their environment. Many secondary metabolites are produced by groups … a secondary metabolites portal within the Integrated Microbial Genomes and Microbiomes (IMG/M) system known as … data.   The SMC ( smc.jgi.doe.gov ) is designed with two main objectives. First and foremost, it is a BGC repository …

Matt is broadly interested in the interactions between microbial life and environment, and using metagenomics to study these complex natural systems. Microbial communities living in hard-to-reach places that …

… and their hitchhikers. The Science Within the archaeal domain, there is a group of tiny hitchhikers. These organisms … connected to the global carbon cycle. Archaea are key players in this deep biosphere. They have adapted to acquire … Laboratory, Hokkaido, Japan. From samples of both environments, they used fluorescence  in situ hybridization to …

… in other forms of  Chloroflexota that adapted to marine environments hundreds of millions of years ago.  The Impact … to spring. These biodiversity hotspots harbor specialized microbial communities living in extreme conditions. The … to inhabit marine environments, while echoes of others remain.  Until now,  Chloroflexota had not been known to …

… resources for DNA sequencing. … No. However, the JGI does maintain a list of protocols, found in our HERE (TK) , used … details with your project manager. … The JGI does not maintain DNA, cultures or stocks of any organisms. These … for functional annotation/curation of your genomes Microbial (IMG–ER) Metagenome and Single Cell (IMG/ M-ER) …

… to enable great science that will help solve energy and environmental challenges. In March 2008, the genome sequence of … the French National Institute for Agriculture, Food and Environment (INRAE). Today, there are nearly 200 mycorrhizal … 1000 Fungal Genomes Project.       Francis Martin on the main impact of ectomycorrhizal fungi, excerpted from his …

… presence of methanogens in nearly all types of anaerobic environments suggest the diversity of methane metabolisms is … issue of Nature Microbiology , they mined the Integrated Microbial Genomes & Microbiomes (IMG/M) database maintained by the U.S. Department of Energy (DOE) Joint …