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Game On: High School Students Drive Everglades Metagenomics Study
Sample Management Group, attended a conference in Florida to discuss a JGI pilot project involving soil sampling in … they noticed while collecting the samples on canoes just how much change had occurred in this region since the images … added a layer of complexity to the project for figuring out how to bring this project together. The class understood …
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Applying Viral Genomics Expertise to Understanding the Human Virome
JGI researchers lend expertise to develop tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the … global researchers on projects related to understanding how the interactions between viruses and their host microbes …
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The Expanding Universe of Methane Metabolisms in Archaea
Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. Methane is a greenhouse gas 20 … “Therefore, determining under which form it emerged and how it gave rise to the different pathways we see today is … Borrel and Gribaldo said. “Overall, these results show a striking case of how metabolic diversity can emerge …
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High‐resolution phenotyping of sorghum genotypic and phenotypic responses to low nitrogen and synthetic microbial communities
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A transcriptomic atlas of acute stress response to low pH in multiple Issatchenkia orientalis strains.
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Adina Howe
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A … Analysis of the genome sequence also provides insights into how the multiple chromosomes of Miscanthus arose by ancient … Understanding the evolution of polyploidy, and how genomes respond to extra chromosome and gene copies, will help …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute … networking opportunities and fosters discussions on how to capture and characterize viral diversity, understand … analysis to better characterize how viruses infect soil microbes and influence how soil ecosystems function. He was …
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The epsomitic phototrophic microbial mat of Hot Lake, Washington: community structural responses to seasonal cycling
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The White-Rot Basidiomycete Dichomitus squalens Shows Highly Specific Transcriptional Response to Lignocellulose-Related Aromatic Compounds
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SIPs with Standards
Stable Isotope Probing (SIP) is a powerful technique for studying microbial communities. These experiments can show which microbes are handling specific nutrients, or what they're …
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
Lake Mendota sits right next to the University of Wisconsin, Madison. And Trina McMahon's lab has been sampling the microbes of that lake for over 20 years, to understand how the freshwater ecosystem works.  So a few years ago, …
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