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JGI@25: Fueling Investigation into Methane-Making Microbes
… 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will … as well as efficient engineering of biofuels. Since 2010, the JGI has partnered with researchers around the …
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Cultivating Symbiotic Antarctic Microbes
… and ‘omics techniques to experimentally determine that Nanohaloarchaeota are symbionts, rather than free-living organisms as had been originally … lakes are a “treasure trove” of unknown microbes that play critical roles in environmental processes (related …
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How Maize Makes An Antibiotic Cocktail
Maize produces a family of compounds that protects it against infections — using surprisingly few … called zealexins. Even though scientists have identified at least 15 zealexins, they suspect there are even more to … Science Program . And the work is part of a  larger CSP Functional Genomics proposal to understand terpene  …
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Kjiersten Fagnan
Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a petascale postdoctoral fellowship at NERSC and LBNL’s Computational Research Division.. As a postdoc, her research …
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The Surprising Structure of a Shrub Willow Sex Chromosome
A genetic architecture that is characteristic of the sex chromosomes of mammals is, … shrub willow  Salix purpurea , employ the evolutionary strategy we are far more familiar with: differentiating into male and female sexes. For the first time, the …
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Virus-Microbe Interactions of Mud Island Mangroves
…   Later this year, Ian Rambo, a graduate student in Brett Baker’s lab at the University of Texas … worked with the JGI through a Community Science Program (CSP) proposal, and Rambo’s research builds on that. “The …
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Frederik Schulz
… eukaryotic microbes and viruses in environmental sequence data. Dr. Schulz employs multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) … to the JGI user community and supports various user projects in the Microbial Program. In an LDRD-funded …
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An Integrated Dataset to Understand Ecosystem Interaction
Research yields a comprehensive tree and soil dataset for understanding the dynamic relationship between poplar trees and their microbial partners. … how ecosystems work and how healthy they are, a recent data set  outlined in  Scientific Data connects molecular …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep subsurface ecosystem. The … in Earth’s deep subsurface. They are abundant representatives of deep subsurface ecosystems. A team of researchers described how the viruses repeatedly attempted to infect and destroy the host archaea – …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… assistant professor Suzanne Sindi from the School of Natural Sciences and started a program that offered a handful of graduate students summer research experience at the JGI. On July …
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Workforce Development & Education Outreach
… activities in this space.         Special Outreach Initiatives: … The JGI and UC Merced have had a long-standing internship partnership that started in the summer of 2014. … Modeled on the JGI-UC Merced internship program, a similar collaboration with AAMU was launched in 2024.  … The CalTeach Summer …
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Ian Blaby
Since 2019 Dr. Blaby heads the DNA synthesis platform at the Joint Genome Institute, where he leads three groups … DNA design and assembly, strain engineering and bioinformatic tool development/data analysis for synthetic biology …
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