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Programs & Platform Leads
As an Integrative Genome Science User Facility, the JGI plays a leadership role in enabling the frontiers of research related to DOE’s missions in bioenergy, … the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, and DNA …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
Congratulations to Tanja Woyke, who has been awarded the van … User Programs. Earlier this year, she was elected to the American Academy of Microbiology (AAM). She has led JGI’s … a 2014 Berkeley Lab Director’s Award for Exceptional Scientific Achievement , and was among the Lab’s 2015 Women …
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Jane Grimwood Named HudsonAlpha Genomics Chair
Congratulations to Jane Grimwood, who has been appointed the … City. Grimwood is also co-director of the HudsonAlpha Genome Sequencing Center. Grimwood heads the Library … after the JGI was established to work on the Human Genome Project in 1997. She was a group lead at Stanford Human …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky Way, … order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE Office of Science user facility … Laboratory, have collaborated with global researchers on projects related to understanding how the interactions …
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Matt Blow
Blow carried out postdoctoral work at LBNL, where he worked on computational and experimental approaches to study genome regulation in human and other vertebrate genomes. When he joined the JGI, he worked as a project scientist and then as a research scientist on …
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A Grass Model to Help Improve Giant Miscanthus
… of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … Miscanthus sinensis has been published. Analysis of the genome sequence also provides insights into how the multiple … chromosomes of Miscanthus arose by ancient hybridization (polyploidy) and insights into the dynamics of gene …
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Computationally Classifying Fungal Lifestyles
Machine learning methods were applied on sequenced fungal genomes to classify gene families. The … data generated in part through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact …
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A Complex Confection Decoded: Sugarcane Reference Genome
… was the last major crop without a reference quality genome and now crop researchers can work toward advancing sugarcane biotechnology. The Science Considered the world’s most harvested crop by tonnage, … of Experimental Botany (IEB) was supported by the ERDF project “Plants as a Tool for Sustainable Global …
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Natural Prodcast Episode 2: The Primer, Part 2
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi, again. This is Dan, and you’re … in partnering with us, we want to hear from you! We have projects in genome sequencing, DNA synthesis, …
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Igor Grigoriev
Dr. Grigoriev joined the DOE Joint Genome Institute in 2003, following his postdoctoral … Institute, a Senior Scientist at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and … of California, Berkeley. He contributed to the Human Genome Project and led annotation and analysis of diverse …
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Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic … in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … A., Hadjithomas M., Varghese N. J., Paez-Espino D., Hungate project, collaborators Perry R., Henderson G., Creevey C. …
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JGI@25: Strengthening Soybean
In honor of the JGI's 25th anniversary in 2022, we have … and energy advantages explain why soybean is a flagship genome of the JGI’s Plant Program.    While soybean has … source of both protein and oil was also the largest plant project completed by the JGI. It has since been cited more …
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