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Uncovering Novel Genomes from Earth’s Microbiomes
… leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications.   … and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the study of the microbial communities in the … on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) platform. Eloe-Fadrosh noted that it was a nice …
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Matt Blow
… and then as a research scientist on projects to develop functional genomic technologies and to understand genome … the lead of the User Support Analysis group. The group performs custom analysis and develops automated pipelines for … PTA: Near Complete Genomes from Single Bacterial Cells bioRxiv , 2024.01. 30.577819 2. Dicenzo et al. …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth (Toby) Kellogg and … agreed. “Getting that information is hard. There’s a good reason nobody’s done it; it’s a heck of a lot of work. … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Toward More Efficient Artificial Photosynthesis
Chloroplast mimic a platform to capture and utilize carbon in a synthetic fixation … cycle. The Science Chloroplasts are the factories in plant cells. Using photosynthesis, they take raw materials … (Berkeley Lab). Supporting the Erb lab through the CSP Functional Genomics call, the JGI synthesized library of …
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Fungal Friends or Foes in Plant Roots
… health and diversity, which can in turn boost yields for both food and for candidate bioenergy feedstock crops. … plants (endophytes). These include genes that degrade plant cell walls and break down plant sugars. The results also … of the key community participants and enabling future metagenomics studies.   … The sequencing project was funded by …
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You Can Move, But You Can’t Hide
… entities that seek to replicate themselves and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. They can be found in … cycles around them. By understanding more about the genomics of MGEs and their evolution at the cellular level, …
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UC Merced Interns Reflect on Their JGI Summer Projects
Over the course of eight weeks this past summer, 10 students from UC Merced worked closely with JGI … skills as well as build their network in the field of genomics and scientific research. The topics students worked … language processing techniques to categorize genetic information. Learn more about their work here in a series of …
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Doubling Down on Known Protein Families
Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach to … unique makeup of microbe players and the functions they perform, artificially replicating a whole community is … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Driving through stop signs: predicting stop codon reassignment improves functional annotation of bacteriophages
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Draft genome sequence of Actinotignum schaalii DSM 15541T: Genetic insights into the lifestyle, cell fitness and virulence
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Multicellular magnetotactic bacteria are genetically heterogeneous consortia with metabolically differentiated cells
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Low-abundance populations distinguish microbiome performance in plant cell wall deconstruction
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