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David Goodstein
With a background in experimental and computational surface physics, Dr. … equipment manufacturer KLA-Tencor before joining the JGI in 2002. Initially focused on building tools to … for the JGI's direct collaborators and the wider plant science community. Dr. Goodstein’s group also develops and …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… of Synthetic Biology celebrates research enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to … work. This is where the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling Florida high school … islands to cattails. In 2018, the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have … our collaborations and capabilities to enable great science that will help solve energy and environmental … in the journal Science. It detailed how they’d used metagenomics — a then-novel approach which allows scientists to …
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Evolution of a Fungal Gene Expression Regulator
… date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in a genome sequence can … Fungal Genomes initiative of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and others like …
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New Lineages of Life Group
… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and … an expanded complement of translation system components. Science, 356 (6333), 82-85 Schulz et al. (2016) A …
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A comparative genomics study of 23 Aspergillus species from section Flavi
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Comparative genomics of Rhizophagus irregularis, R. cerebriforme, R. diaphanus and Gigaspora rosea highlights specific genetic features in Glomeromycotina
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JGI@25: Building a Better Bean
In honor of the JGI's 25th anniversary in 2022, we have … our collaborations and capabilities to enable great science that will help solve energy and environmental … Phaseolus as a test model quite frequently for R&D in plant genomics, because it is an inbred dicot,” Schmutz explained, …
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Synthesis
The Joint Genome Institute's DNA Synthesis Platform capabilities … team has three subgroups: Synthetic Biology Lab : a user science group dedicated to user project design, assembly, … assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables users to validate …
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Effects of Polar Light Cycle on Microbial Food Web
… lake microbial communities change with the seasons. The Science Light-harvesting bacteria (phototrophs) in … long ago, this shift to archaea being the main producer doesn’t occur here. Understanding this fundamental … Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published …
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Three Join the JGI User Executive Committee
The JGI User Executive Committee (UEC) recently welcomed three … UEC. As a user of the JGI and the Environmental Molecular Sciences Laboratory, another DOE user facility, she will leverage her understanding of …
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