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DNA affinity purification sequencing and transcriptional profiling reveal new aspects of nitrogen regulation in a filamentous fungus
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Marine Microbe Contains Multitudes
… multithreaded bioinformatics tools designed for analysis of DNA and RNA sequence data.  … Datasets … BBTools …
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Extensive Reorganization of the Plastid Genome of Trifolium subterraneum (Fabaceae) Is Associated with Numerous Repeated Sequences and Novel DNA Insertions
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The GC-Rich Mitochondrial and Plastid Genomes of the Green Alga Coccomyxa Give Insight into the Evolution of Organelle DNA Nucleotide Landscape
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An integrated workflow for phenazine-modifying enzyme characterization
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Biochemical characterization of plant aromatic aminotransferases
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Fishing for Novel Cellulose Degraders
… screen, they can now identify microbes with specific functional characteristics. When they tested the screen … cellulases from their captured genomes, the team then used DNA synthesis and cloning, followed by protein in vitro …
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Gene Expression: From On-Off Switch to Dial
… a single RNA piece that recognizes a particular area in the DNA, to determine which targets might benefit from an … the Camille and Henry Dreyfus Foundation, and the JGI Synthesis Program under FP00005685. In addition, M.D. …
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Len Pennacchio
Data Generation Platforms (Sequencing, Single Cell, DNA Synthesis, and Metabolomics) as well as Research & … in both the energy and health sectors. Mammalian Functional Genomics Lab VISTA Enhancers VISTA Cardiac …
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JGI Portals
… integrated context. IMG/M provides tools for analyzing the functional capability of microbial communities based on … over 15 million viral genomes and fragments, enriched with functional annotation, taxonomic classification, and …
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John Vogel
Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served as a … genomic resources that fostered the widespread adoption of Brachypodium distachyon as an experimental model for the … functional validation of the JGI Brachypodium distachyon T-DNA collection. Plant Journal 91(3): p. 361-370. Vogel, et. …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… high-quality genomic information using minute quantities of DNA derived from individual environmental cells. The proof … to move from cataloging microbial diversity to experimental characterization and validation of the functional potential of these new lineages. …
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