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Conserved genomic collinearity as a source of broadly applicable, fast evolving, markers to resolve species complexes: A case study using the lichen-forming genus Peltigera section Polydactylon
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Genome‐wide association studies and expression‐based quantitative trait loci analyses reveal roles of HCT2 in caffeoylquinic acid biosynthesis and its regulation by defense‐responsive transcription factors in Populus
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… diversity of large and giant viruses. While the microbes in a single drop of water could outnumber a small city’s … much less those considered large and giant. In a recent study  published in the journal  Nature , a team led by … been co-cultivated with amoeba or with their hosts, though metagenomics is now making it possible to seek out and …
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CSP New Investigator Call
The CSP New Investigator Call is for investigators and research initiatives new to the JGI. Projects must be independent of …
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Behind the Paper: Hot Springs Metagenomics
Adapting the graduate research experience amidst a global …
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A Bioinformatician's Guide to Metagenomics
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Tanja Woyke
After studying the mechanism of action of antifungal natural products … she deciphered function and host-symbiont interplay using metagenomics. Taking on a Research Scientist position in 2007, she switched gears from metagenomics to single-cell genomics, which is now her …
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Institutional User Agreements
… starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or the …
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Effects of Polar Light Cycle on Microbial Food Web
… change with the seasons. The Science Light-harvesting bacteria (phototrophs) in Antarctica’s Ace Lake defy the … aligned with light availability. A long-running time-series study offers a first glimpse into a full season’s cycle of … were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published in  …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… a team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, … and replicating with their host indefinitely. Now, in studying a microbial mat from Cone Pool in Mono County, … painting a more systematic picture through single-cell and metagenomic sequencing. A team co-led by Mária Džunková, …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… s ditched their flagella and other traits when migrating back to the ocean. The Science Scientists have … chemicals not typically found in oceans or soils.  A recent study published in  The ISME Journal     focused on a class … that enable organisms to swim around. However, genome and metagenomic sequencing conducted by the U.S. Department of …
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ClaMS: A Classifier for Metagenomic Sequences
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