Search

Ken leads the development and maintenance of analytical tools and user interface components for the IMG family of systems. …

… an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing data gathered … such as  Mash and  BBsketch , whose lead developer is JGI software developer Brian Bushnell, no alignment-free tool … Resources Division (CRD), in order to create more useful tools for the bioinformatics community. Other work presented …

… strain engineering and bioinformatic tool development/data analysis for synthetic biology and functional genomics. …

… interactive collection of sequenced algal genomes, omics data and comparative analysis tools developed by the Joint Genome Institute (JGI), a US Department of Energy Office of Science user facility at Berkeley Lab. Presented by Igor Grigoriev, …

… with excitement and determination as they came onsite. From data carpentry to science communications, their schedules … and mentor Bryce Foster, Benchmarking Bioinformatics Tools for Sequence Similarity Searching Morgan Lavenstein … I wasn’t familiar with in terms of machine learning and new software I’d never been using before. I also wanted to …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at Lawrence Berkeley National … has looked for DGRs in a broad range of publicly available datasets. They’ve discovered that DGRs are not only … level. Scientists might then harness them as molecular tools for research and industry applications. Summary In …

… recently selected as the 2025 recipient of the Microbiome Data Prize by the American Society for Microbiology (ASM). … the virus and plasmid workflows for the National Microbiome Data Collaborative.  This award recognizes distinguished research achievements that support open data practices, development of standards and processes for …

Lead position in 2009 and assumed the Deputy Director of User Program position in 2021. In addition to her JGI … Merced's School of Natural Sciences since 2015. Prospective users with specific questions regarding their proposed … J (Senior Editor 2016-2021), Peer J (2015-2019), Scientific Data (2017-2019). Reviewer for major journals and funding …

… describe their deep dives into genomics, computational tools, and big data.  …

Genomics (formerly DNA Synthesis) call, and he noted the data had driven his lab’s focus on guide RNA library generation and development and its … or through the  “Facilities Integrating Collaborations for User Science” (FICUS) initiative .  Q: What is the …

… .) This plan aligns the DOE Office of Science user facility with broader national efforts to promote and … a vast range of organisms and ecosystems. These kinds of data could open opportunities along multiple avenues, … expect to offer our user community an exciting range of new tools and capabilities to support their scientific …