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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida high … school scientists. The Florida Everglades evokes images of fanboats skimming over swamps, while alligators peer … in the Arthur R. Marshall Loxahatchee National Wildlife Refuge, a 226-square mile area of the northern …
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Four Researchers Join JGI User Executive Committee
… have been elected to the User Executive Committee of the Joint Genome Institute, a Department of Energy user … biological and environmental systems. The foundational studies enabled contribute to the development of bio-based … Bik is a recipient of the Community Science Program (CSP) New Investigator call. Through membership in the UEC, …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep subsurface ecosystem. The … Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are … populations respond to virus infections, researchers are using Altiarchaea as a model system to study virus-host …
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Frederik Schulz
… Genome Institute in 2016 and is leading the New Lineages of Life Group. His research is focussed on the discovery of … eukaryotic microbes and viruses in environmental sequence data. Dr. Schulz employs multi-omics (metagenomics, … B.Sc. Biochemistry, University of Applied Sciences Mannheim (Germany) M.Sc. Molecular …
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Simon Roux
… the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development of novel computational tools to identify virus sequences, the design of new … and virus-host interactions in microbial systems. Through a 2021 DOE Early Career Research Program, Dr. Roux established …
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Sequencing Submission Requirements for DNA Synthesis
… How To Create an Annotated GenBank File There are several easy-to-use open source … GenBank files. ApE is an open source desktop application written by M. Wayne Davis or commercial options … add the characters “.gb” (no quotes, just .gb) to the end of your file name. …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
…   On November 3, 2021, the JGI and the Workforce Development & Education department of Lawrence Berkeley National Laboratory (Berkeley Lab) …
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JGI Workshops at 33rd Fungal Genetics Conference
… Wednesday, March 18: "Genomics of Environmental Opportunism: Fungal Adaptation at the Edge of Pathogenicity" Workshop Steven Ahrendt presenting  …
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JGI announces final round of 2022 Functional Genomics awardees
… Twice each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential … genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that …
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Introducing New Members of the JGI User Executive Committee
… JGI User Executive Committee (UEC) : Roland Hatzenpichler of Montana State University, Teresa Pawlowska of Cornell … reasons for wanting to serve on the UEC. Hatzenpichler, who studies sediment-dwelling archaea, expressed his interest in … and can serve no more than two consecutive terms. In late 2021, the JGI launched a solicitation for nominations for …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … crop productivity across 1,100 miles and eight states. In 2021, using switchgrass samples from these gardens, a team … climate resilient switchgrass. Aside from climate-related studies, researchers have also harnessed the switchgrass …
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Phytozome: Tutorial Workshop from 2022 CROPS Conference @HudsonAlpha
… workshop held during the June 2022 CROPS Conference at the HudsonAlpha Institute for Biotechnology. Phytozome is the Plant Comparative Genomics portal of the Department of Energy Joint Genome Institute, and … facilitates accurate and insightful comparative genomics studies. …
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