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The genome portal of the Department of Energy Joint Genome Institute: 2014 updates
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From Competition to Cooperation
Tracking evolution of symbiotic lifestyles across multiple fungal … the framework of the Mycorrhizal Genomics Initiative (CSP # 305), Metatranscriptomics of Forest Soil Ecosystems … Program of the Hungarian Academy of Sciences (Grant No. LP2019/13-2019) and the National Research, Development and …
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JGI@25: From Life at the Extremes to Editing Genomes
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … Berkeley and Lawrence Berkeley National Laboratory – jointly the Nobel Prize in Chemistry with Emmanuelle … in a Two-Protein-type V-C CRISPR System. Mol Cell. 2019 Feb 21;73(4):727-737.e3. doi: …
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Crops as Tough as World Cup Turf
In our warming world, we’ll need corn, sorghum and other crops to grow well in worse conditions: with more heat, less water and less fertilizer. Grasses do better in these conditions, so plant biologists James Schable, …
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JGI@25: Using Team Science to Build Communities Around Data
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would complement these …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
Understanding the shared genetic toolkit of ancestral and present-day plants The Science In a recent  Nature Genetics paper , researchers focused on … (ANR LEVEL-UP ANR-21-CE20-0010-01) to C.J., from ZhuJiang (2019ZT08N628) and the National Natural Science Foundation of …
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Natural Prodcast Episode 11: Marnix Medema
… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural …
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Marine Microbe Contains Multitudes
A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different lifestyles. The Science The … two main groups: two ecotypes dwell in the sunlit upper waters (above 200 m, or 656 ft), and have genes to support a …
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John Vogel
Dr. Vogel joined JGI in 2014 to establish a plant functional genomics … Varoquaux, et. al.N. 2019 Transcriptomic analysis of field-droughted sorghum from … Natl. Acad. Sci. 116 (52) 27124-27132 Sasse, et. al.J. 2019 Multilab EcoFAB study shows highly reproducible …
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JGI User Executive Committee Expands
Committee (UEC) of the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … he’s interested in finding ways to boost visibility of the CSP to encourage more plant proposals and provide feedback … functioning of ecosystems. She leads a recently approved CSP New Investigator proposal to understand the genetic …
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JGI Announces 2025 New Investigator Portfolio
Ian Gilman, Louis Graf, Yuxi Guo, Shaomei He, Vayu Hill- Maini, Forrest Lefler, Pok Man (Bob) Leung and Huang Li; … and Mar Schmidt; [bottom] Cody Spiegel, James Tan, Emma Timmins-Schiffman, Andressa M. Venturini, Valentin Waschulin, Flavia Winck Vischi, Jennifer …
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The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata
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