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Fungal & Algal Program
… Program aims to streamline genome analysis workflows for microbial eukaryotes, build fungal and algal pangenomes, and … The program also explores microeukaryotic members of microbial communities, cataloging gene markers, and …
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FICUS Overview
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Adam Reisselman on being a 2016 DOE Computational Science Graduate Fellow
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JGI Accepts 17 Proposals for Community Science Program
… been approved through the annual Community Science Program (CSP) call of the U.S. Department of Energy (DOE) Joint … State University and colleagues are interested in the microbial communities that live on Alaska’s glacially … proposal from Viola Krukenberg at Montana State University successfully evolved from a white paper approved through …
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Cultivating Symbiotic Antarctic Microbes
… cycle. The JGI is sequencing large numbers of microbes and microbial communities that contribute to carbon cycling, and … help researchers better understand the factors controlling microbial symbiotic relationships. Summary Symbiotic … symbionts. Cavicchioli’s graduate student, Joshua Hamm, successfully cultured two strains of Nanohaloarchaeota and …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… Meta-omics datasets show that CRISPR-Cas systems determine mutualism or parasitism between some archaeal hosts and …
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Workforce Development & Education Outreach
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JGI User Executive Committee Expands
… he’s interested in finding ways to boost visibility of the CSP to encourage more plant proposals and provide feedback … functioning of ecosystems. She leads a recently approved CSP New Investigator proposal to understand the genetic … her institution and Bioenergy Research Centers. Sogin is a microbial ecologist at UC Merced, where her group focuses on …
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Simon Roux
… knowledge of viral diversity and virus-host interactions in microbial systems. Through a 2021 DOE Early Career Research … and evolutionary drivers of virus-host dynamics in soil microbial communities. … microbiome. Nature Communications 12, 3076. Roux et al., 2018. Minimum Information about an Uncultivated Virus Genome …
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JGI Announces 2025 New Investigator Portfolio
… and environmental DNA sequencing to explore microbial and plant interactions across unique ecosystems, …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… around the world to map out genomes of rumen microbes. In 2018, through a JGI Community Science Program proposal that … aim is identifying chemical compounds that could inhibit microbial methane production. Another effort is in using microbial understanding to formulate a vaccine for …
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A survey of computational approaches for characterizing microbial interactions in microbial mats
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