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Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, and incredibly complex — making it difficult to grasp a deeper … to Z.-H.C.). B.A.A. and D.W.S. acknowledge funding for this project from the Ambrose Monell Foundation. … Ceratopteris …

… the sex chromosomes of mammals is, for the first time, seen in a plant. The Science Sex in plants can be befuddling. … and females even when plants with multi-year generation times are young and haven’t physically differentiated. … (2017YFC0505203, 2016YFD0600101), and the National Key Project for Basic Research (2012CB114504). The work …

… forms of MGEs are viruses and plasmids. They can be found in virtually all of Earth’s ecosystems. A software tool  … Resource (IMG/VR) , now with more than 15 million viral genomes. It was also key to developing the first version of … used computational resources from the Exascale Computing Project (17-SC-20-SC), a collaborative effort of the U.S. …

Using a novel computational approach, researchers confirm … through the publicly available  Integrated Microbial Genomes & Microbiomes (IMG/M) database, they successfully … well, randomly,” Kyrpides explained. “Replicating that 100 times would have been almost impossible.”  When the team was …

… for new technology development and JGI user science projects. We perform analysis for diverse experiment types, with main focus areas being genome variation, transcriptomics and … Our group also performs ‘proof-of principle’ research projects to demonstrate new genomic capabilities. Our group …

In honor of the JGI's 25th anniversary in 2022, we have … (INRAE). Today, there are nearly 200 mycorrhizal fungal genomes publicly available on the fungal portal MycoCosm, … many sequenced through the JGI 1000 Fungal Genomes Project.       Francis Martin on the main impact of …

Harnessing BER-funded data resources, researchers built an … browser that allows other researchers to study the genomes and predict the metabolic abilities of these … than 400 cultured rumen prokaryotes from the  Hungate1000 project . They also used the tool to predict possible …

Dr. Blow joined the JGI in 2009, and currently heads the User Support … to study genome regulation in human and other vertebrate genomes. When he joined the JGI, he worked as a project scientist and then as a research scientist on …

Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. Methane is a greenhouse gas 20 times more potent than carbon dioxide. Billions of years …

The Science The humble lichen is a superorganism: one being that is actually comprised of two (or more) … For the first time, a team has analyzed in parallel the genomes and transcriptomes of both partners to better … lichens. Studying the symbiosis by investigating a lichen’s genomes and transcriptomes could help inform efforts at …

… for multiple applications.       Despite advances in sequencing technologies and computational methods in the past decade, researchers have uncovered genomes for just a small fraction of Earth’s microbial … hope JGI and other institutions continue to do this kind of projects.” The work also used resources of the  National …