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SIPs with Standards
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Making a Lichen Together
… investigating a lichen’s genomes and transcriptomes could help inform efforts at bioengineering symbiotic microbial … deciphering their internal molecular mechanisms can help researchers better model global carbon and nitrogen … seconds or minutes — a trait that could help improve crop drought resilience. It’s a superpower even Marvel’s …
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Complete Genome Sequence for Asinibacterium sp. Strain OR53 and Draft Genome Sequence for Asinibacterium sp. Strain OR43, Two Bacteria Tolerant to Uranium
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Duplications and losses of genes encoding known elements of the stress defence system of the Aspergilli contribute to the evolution of these filamentous fungi but do not directly influence their environmental stress tolerance
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The Expanding Universe of Methane Metabolisms in Archaea
… of this metabolism to geochemical data, which in turn can help to understand its impact on climate along earth … five only distantly related to known methanogens. With the help of this information, the researchers found evolutionary … two metabolic pathways “Up to this point, most phylogenomic trees have relied on only one korarchaeotal representative,” …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… and capabilities to enable great science that will help solve energy and environmental challenges. Switchgrass … switchgrass genes related to biomass production, drought tolerance, and other traits that make it a viable … has become an important species whose complex genomes are helping breeders understand how they can boost crop …
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The Case for Conservation
How sex chromosomes “older than dinosaurs” could help improve crop yields.  The Science The fire moss … such as UV irradiation, heavy metal contamination, and drought. The moss genomes’ metabolic pathways could lead to …
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Axel Visel
Wang Z, Visel A (2013). De novo transcriptome assembly of drought tolerant CAM plants, Agave deserti and Agave …
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Fungal Friends or Foes in Plant Roots
… associations between plant roots and fungi that can help or harm plant host health. The Science Researchers … fungi. Their analysis identified fungal gene families that help determine if these fungi act as friends or foes. The …
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JGI at the AGU Fall Meeting
Honeker, University of Arizona (lightning talk): “Effect of drought on soil microbial metabolisms driving carbon … profiling in roots reveals plant specific responses to drought at the Biosphere 2 tropical rainforest” …
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In Silico Analysis of the Metabolic Potential and Niche Specialization of Candidate Phylum "Latescibacteria" (WS3)
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
What Wint and her mentors discovered in the genomes helped to reinforce Charles Darwin’s “survival of the … from this project may also have a practical relevance with helping to synthesize codon-optimized fungal genes for … program requires all interns to build presentations that help to explain their work and its impacts at Berkeley Lab …
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