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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… the surrounding neighborhood,” said Benjamin Cole, senior author of this work. Cole is a research scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … in those environments,”  Karen Serrano said. She is first author of this paper and a graduate researcher at the Joint …
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Nigel Mouncey
… and today, focuses on continuing to build and position JGI as a leading integrative genome science user facility. In addition to serving as JGI Director, Dr. Mouncey leads his own science group at JGI focused on secondary metabolites. He is also on the …
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Synthesis
… assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables users to validate … develop, deploy, and maintain software that support the JGI’s Synthetic Biology Program.    Representative software … and associated tools, which track samples through the JGI’s Synthetic Biology pipeline as well as provide process …
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Massie S. Ballon
S. Ballon is the Communications and Outreach Manager at the JGI. Prior to this role, she served as the primary storyteller and social media manager for the JGI. She produced both text-based and multimedia stories that were then shared along with other JGI-relevant content on social media. She is also involved …
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Taking Stock of the Known and Unknown Microbial Space
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … of their diversity we've actually captured,” said co-first author Dongying Wu, a member of the Functional Annotation … only scratched the surface.” The study, added co-first author Rekha Seshadri, is a wake-up call to revive the art …
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CSP New Investigator Call
… is for investigators and research initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will …
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Science Programs
The JGI’s Science Programs offer support to users and their research efforts.  JGI scientists lend their expertise to enhance the … for them. Their concerted efforts help maximize the JGI’s impact in advancing both user science and the DOE …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
A group led by JGI scientists have made strides in improving and applying a … to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  announced in  Nature … our ability to offer host-engineering for our users,” says JGI Director Nigel Mouncey. Using CRAGE, JGI has established …
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Products
The JGI has diverse capabilities in: DNA and RNA sequencing, … is provided for all sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the … shotgun sequencing Assembly, annotation ( Mycocosm ) 256/404 Fungal Standard Draft Whole genome shotgun sequencing …
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Green Algae Reveal One mRNA Encodes Many Proteins
… a research scientist in Sabeeha Merchant’s lab and first author of the article. The research team included scientists … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … (FICUS) collaborative science initiative between the JGI and EMSL.  … The U.S. Department of Energy Joint Genome …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
New 5-year strategic plan outlines how the JGI will advance the bioeconomy, leveraging partnerships to … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released its newest 5-Year Strategic Plan: … requires a deep understanding of biological systems. The JGI strategic plan lays out how users and the global …
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New Research Sheds Light on Diversity in the Deep Sea
… and the University of Wisconsin-Madison collected 40 samples from five oceanic regions to better understand … to the study as well as  genome analysis, providing authors a more complete picture of the taxonomic composition … the communities studied. The datasets are available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) …
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