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FICUS-NERSC/KBASE
… The mission of the Joint Genome Institute is to serve the scientific community as a … and readiness to begin work, checking such factors as genome size, polymorphism level, sample quality and …
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An Addiction Crucial to a Fungus’ Reproduction
… endobacteria, the Rhizopus fungus cannot act as a plant pathogen, it cannot reproduce asexually, and researchers … host. Using the mutualistic relationship between the plant pathogenic fungus Rhizopus microsporus (Rm) and Burkholderia … at Cornell University and scientists at the Joint Genome Institute, a DOE Office of Science User Facility was …
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The Chlamydomonas Genome Project, version 6: reference assemblies for mating type plus and minus strains reveal extensive structural mutation in the laboratory.
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Comparative Analyses of Four Reference Genomes Reveal Exceptional Diversity and Weak Linked Selection in the Yellow Monkeyflower (Mimulus guttatus) Complex
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Data Ecosystem
… analyses, such as metabolic modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek to … data on scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and understanding. JGI and …
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Virulence of banana wilt-causing fungal pathogen Fusarium oxysporum tropical race 4 is mediated by nitric oxide biosynthesis and accessory genes
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Complete genome sequence of the rapeseed plant-growth promoting Serratia plymuthica strain AS9
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JGI@25: Using Team Science to Build Communities Around Data
… (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science … the effort to sequence 1000 fungal genomes to create two reference genomes for all fungi families — essentially, the foundation for an encyclopedia of reference genomes for fungal metagenomics. Two more CSP …
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JGI Advisory Committees Code of Conduct
… staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National …
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A new reference genome for Sorghum bicolor reveals high levels of sequence similarity between sweet and grain genotypes: implications for the genetics of sugar metabolism
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Natural Prodcast Episode 19: Bill Fenical
… So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And … eight of these weird bacteria. And we proposed to the Joint Genome Institute. DAN UDWARY: Oh, that’s where we come in. … that we needed to ask whether they would do the full genomes for us. So fortunately, the secondary metabolite …
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Building Sphagnum Genomic Resources
… the CSP, researchers are aiming to have two high quality reference genomes for peat-forming species that occupy different … – Sphagnum fallax and S. magellanicum. The draft genome for  S. fallax is already available on the  JGI plant … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science of …
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