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Recent Activity in Expanding Populations and Purifying Selection Have Shaped Transposable Element Landscapes across Natural Accessions of the Mediterranean Grass Brachypodium distachyon
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Outreach Stories
Interested in reading more JGI intern and mentor success stories? Read more below. …
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Variation in Adult Plant Phenotypes and Partitioning among Seed and Stem-Borne Roots across Brachypodium distachyon Accessions to Exploit in Breeding Cereals for Well-Watered and Drought Environments  
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NeLLi — Symposium on New Lineages of Life
… and single-cell sequence data have provided a means to access novel microbial lineages, leading to a new … Hatzenpichler, Montana State University Maggie Sogin, UC Merced   …
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Rex Malmstrom
Applications group to operate a similar single-cell genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group … active, membrane-bound organelles. Science  376,1453-1458 Nuccio et al 2022 . HT-SIP: a semi-automated stable isotope …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… a microbial mat from Cone Pool in Mono County, California, scientists have used sequencing methods for the first time … they’d likely have a hard time finding more. … The work conducted by the U.S. Department of Energy Joint Genome … JRS is supported by the NASA Astrobiology Institute Rock Powered Life grant. RS is supported by NSF grants …
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Axel Visel
… computational and experimental sequence-based methods for elucidating the gene regulatory landscape of vertebrate … School of Natural Sciences at the University of California, Merced. Dr. Visel also served as JGI Interim Director from … tolerant CAM plants, Agave deserti and Agave tequilana. BMC Genomics  14, 563. May D, Blow MJ, Kaplan T, McCulley DJ, …
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Marine Microbe Contains Multitudes
A deep dive into microbial genomics reveals one bacterial species is made of four … pressure of the dark abyss, 4000 m (2.5 miles) deep. Scientists have wondered, how can SAR324 exist in so many … at different depths. In order to determine the genome structure of SAR324 cells and their gene expression, the team …
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Microbial Genomics & Metagenomics (MGM) Workshop
… (JGI) is offering a five-day workshop on Microbial Genomics and Metagenomics. Details: mgm.jgi.doe.gov   This highly hands-on … sequence data. IMG/M is a web-based platform that provides access to the wealth of public microbiome sequence data and …
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Nigel Mouncey
… has a long-standing interest in microbial genetics that started with his education and carried forward into his roles as a senior … international forums. Breaking the Wall of Environmental Genomics … Jensen, R. O. et al. 2024. Phylogenomics and …
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Exploring Phages at JGI
… working at a national laboratory. However, through the JGI-UC Merced internship program, I was able to collaborate with extraordinary scientists and gained exposure to new and different …
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Massie S. Ballon
… storyteller and social media manager for the JGI. She produced both text-based and multimedia stories that were then … and a graduate certificate in science communication from UC Santa Cruz. She is one of the Biosciences Area … Equity & Accountability (IDEA) Chairs Council.   … 2020-2021, UC Women’s Initiative (North Cohort) UC Managing Implicit …
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