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Our research is focused on the discovery and characterization of novel … in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and … and machine learning to identify new divergent lineages and expand the Tree of Life. We then investigate …

The 1KFG project represents affiliations at over 180 organizations in 29 U.S. states and 35 countries. (Graphic: … for an encyclopedia of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would … Spatafora and Jason Stajich from UC Riverside would focus on broad sampling of early diverging fungi, and Francis …

… analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple … knowledge. In a study published November 11, 2022, in Cell Genomics , the team focused on Actinobacteria ( … information as well as of important descriptive metadata about each strain. “This has been a very fruitful …

… the location of genes that provide resistance to the brown rust disease that can devastate a crop. The Impact In … genome could help scale sustainable sugarcane conversion technologies for  biofuels and other bioproducts. Finally, … the HudsonAlpha Institute for Biotechnology and the Arizona Genomics Institute. The work was partly enabled by the JGI’s …

To provide broad plant genomic capabilities, the DOE Joint Genome Institute works … specific conditions – in over a dozen plants. To learn more about the project, HudsonAlpha’s Research Communication … It was developed to improve plant genome annotations at the US Department of Energy (DOE) Joint Genome Institute (JGI)*, …

… health. Three DOE national labs had people and resources focused on three human chromosomes: Lawrence Berkeley National … researchers were studying Chromosome 5, which contains about 6% of the human genome . They discovered genes linked … user facility. The staff and resources shifted to offering genomic science capabilities for energy and environmental …

… the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help translating genomic information into … the next deadline is July 31. You can learn more about our Community Science Program here .  …

… carbon and cycle key nutrients like nitrogen and phosphorus.  This way, the fungi of forest soils hold keys to tree … fungal metatranscriptome yet,” said Igor Grigoriev, Fungal Genomics Program Head at the JGI.  Along with an improved … give researchers a way to access much more information about fungi in these environments. “Now with these new tools …

The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of … produced by groups of genes known as biosynthetic gene clusters (BGCs.) As reported in the recent Database issue of … of the closest comparable database. … Dan Udwary talks about the Secondary Metabolism Collaboratory  … Browse BGCs …