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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first sampled the area in summer 2016.  She described the microbial diversity patterns of Puerto Nuevo’s coastal … Associated Microbes and Parasites. Ul-Hasan credits her JGI-UC Merced summer internship for helping lay the …
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Digging into Microbial Ecosystems Deep Underground
… at Colorado State University have many questions about the microbial communities deep underground, and before the pandemic, they took the JGI on a sampling field trip. One of the questions they’re … have tapped into the resources and capabilities of both the JGI and the Environmental Molecular Science Laboratory …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of microorganisms live among … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Community Science Program
… sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  … call is for expansive projects that leverage a range of JGI capabilities, and also requires a Letter of Intent. The New Investigator call is for PIs who have never led a JGI project, and the Functional Genomics call is for …
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Natural Prodcast Episode 20: Brian Bachmann
… you can always find at naturalprodcast.com or through the JGI website at jgi.doe.gov . There’s a lot more to talk about there, and … of thought with that. So some people are interested in cave microbial– people are interested in the more extreme …
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Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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Natural Prodcast Episode 8: Eric Schmidt
… can use peptides for! That’s what his collaboration with JGI is all about, and we talk about it a bit here. I have … And that’s related to what my project is with the JGI. Where, it’s again, with ribosomal peptides, we’re … DAN:  Yeah. Do you want to talk a little more about your JGI project?  ERIC:  Sure. So with that project, we’re …
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FICUS-NERSC/KBASE
… expand upon highly successful past collaborations, the DOE JGI, NERSC and KBase issued a call for proposals in … as part of the FICUS initiative. Proposals submitted to the JGI-NERSC-KBase call do not use the Letter of Intent; rather … review cycle. All proposals undergo technical review by JGI staff as well as staff at the other participating …
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How to Target a Microbial Needle within a Community Haystack
… strides in generating genome sequences for members of the microbial world through bulk community sequencing … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Development of this protocol was enabled by the JGI’s  Emerging Technologies Opportunity Program . The ETOP …
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Marine Microbe Contains Multitudes
A deep dive into microbial genomics reveals one bacterial species is made of … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Berkeley National Laboratory (Berkeley Lab), through the JGI Community Science Program . The metagenomes were also …
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Benjamin Cole
… … List of pubs available on NCBI … Implementation of the Index of Cell Identity as an R package … Education … …
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