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Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… all the work that went into this program was the feedback from the graduate student interns; “it changed what I want … interns. For him, it was a special moment to see interns go from being “intimidated and nervous” at the beginning of the … was Travis Lawrence , the first graduate student intern from the 2014 cohort. After working on his post-doctoral …
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Mindfully Moving JGI
JGI is in the process of shifting its operations from Walnut Creek to the heart of the Berkeley Lab campus. … that the process of moving 250 people and their equipment from 4 single-story buildings to a new 4-story building 20 …
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Waiting to Respire
Genomes from uncultivated bacteria offers clues to ancestral … lineages Margulisbacteria and Saganbacteria that diverged from the bacterial tree before Cyanobacteria and its … Saganbacteria. At the same time, working with researchers from the Bigelow Laboratory for Ocean Sciences, Microbial …
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The JGI Data Portal: Improving User Experience
JGI Data Portal , a pilot download experience accessible from JGI’s plant portal Phytozome . Although the Data Portal … are more broadly applicable to the download processes from the other JGI Portals, as well. “For thousands of … experience and beginning work on the download experience from MycoCosm and PhycoCosm, with the intent of eventually …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
… faculty members may invite up to two student participants from the faculty member’s home academic institution, one of … and Katherine Louie for the JGI Metabolomics Platform Blake Simmons for The BioManufactory Completed VFP …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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JGI@25: Cow Rumen and the Early Days of Metagenomics
Since one of the challenges of developing alternative fuels from plants is the high cost and resource requirements of … Science. It detailed how they’d used metagenomics — a then-novel approach which allows scientists to study … of rumen-digested switchgrass, researchers isolated and sequenced DNA from rumen microbes involved in the digestion …
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Genes and genome‐resolved metagenomics reveal the microbial functional make up of Amazon peatlands under geochemical gradients
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… laboratory ecosystems to help transition microbiome science from largely observational to reproducible mechanistic …
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Comparative analysis of GT14/GT14-like gene family in Arabidopsis, Oryza, Populus, Sorghum and Vitis
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Introducing New Members of the JGI User Executive Committee
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