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Annotation and sequence diversity of transposable elements in common bean (Phaseolus vulgaris)
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Hybrid error correction and de novo assembly of single-molecule sequencing reads
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Beyond linear sequence comparisons: the use of genome-level characters for phylogenetic reconstruction
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Triplicate PCR reactions for 16S rRNA gene amplicon sequencing are unnecessary
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Deciphering the evolution of flavin-dependent monooxygenase stereoselectivity using ancestral sequence reconstruction
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Fast and accurate identification of plasmids and viruses in sequencing data using geNomad
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Steven Wilson
… Mr. Wilson joined the JGI in 2002.  A fter supporting the sequencing core at Exelixis Biopharmaceuticals as an intern, … Engineer where he added structure and process to the group by developing SOPs for instrument maintenance and operation. … Lead Data Warehouse and Software Quality Assurance teams from April 2012 to 2018.        …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… on microalgal communities across different ocean latitudes from pole to pole, using metatranscriptome and metagenome … bioenergy and biomanufacturing. The JGI Algal Program makes genomes and multi-omics data from JGI CSP projects publicly available at the PhycoCosm portal . Byline: Menaka Wilhelm   …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI researchers and … catalyzed by microbial communities. By pairing RNA or DNA sequencing with tracings of stable, heavy isotopes, SIP … by weeks of tricky, laborious lab work to analyze samples from one experiment. Starting a  few years ago, researchers …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… Sequencing technology has changed dramatically over the … users — have access to high-quality, assembled datasets from all of this information. The JGI aims to create … ecosystem works. When she set out to analyze 500 metagenomes from this sample set through the Community Science …
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The Genome Portal of the Department of Energy Joint Genome Institute
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The Phaeodactylum genome reveals the evolutionary history of diatom genomes
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