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… the microbial communities living in the mountaintop lakes of the Sierra Nevada mountains. These lakes are isolated, …

… school scientists. The Florida Everglades evokes images of fanboats skimming over swamps, while alligators peer … provides the only known reference microbiome data sets for the Loxahatchee Refuge,  was published in the journal  Environmental Microbiome . “Before JGI was involved, I was not sure we could even complete …

… Together, these teams provide analysis support and R&D for production and user science. He received his Ph.D. from … Nottingham University, UK PhD in Genomics, University of Cambridge, UK Postdoctoral training Wellcome Trust Sanger … 85(18):e01210-19 Price et al 2018. Mutant phenotypes for thousands of bacterial genes of unknown function. Nature …

… archaea are estimated to produce 500 million tons of methane a year, which is over half the total global … cycle. All methanogenic archaea use one of three pathways for methanogenesis: hydrogen-dependent and CO2-reducing, or … the microbes into small pools of cells that were then sequenced separately. From these samples, 111 …

… — an energetically expensive feat thought to be too costly for them. The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help them digest … finnis . In work reported in 2017, the fungal genomes were sequenced by the U.S. Department of Energy (DOE) Joint …

… A special issue of Synthetic Biology celebrates research enabled by the JGI … PI on this project. “I view the program as an excellent platform to build collaborative research initiatives.” Yasuo … — and their applications — are evolving. “JGI is famous for its work sequencing human and environmental genomes. But …

… be a specific host the virus has adapted to commandeer. For bacteriophage viruses, these hosts are microbes like … With metagenomic sequencing, researchers have found more of these viruses than ever before, in all kinds of ecosystems. However, matching these viral genetic sequences to their hosts is crucial to understanding what …

… the Community Science Program’s  Functional Genomics call for proposals .  On July 8, JGI’s DNA Synthesis Science … really fully exist back then,” said Hal Alper, a University of Texas at Austin professor, “but we really first heard … the researchers will receive a FedEx package with the sequenced, quality controlled population representing the …

… 2023 marked a decade since the inception of the flagship internship program between the DOE Joint Genome Institute (JGI) and University of California (UC), Merced. What started with 2 interns in the … the Lab. “This project represents part of our long term efforts to contribute towards a diverse workforce and …

… Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever … of Technology he developed a high throughput approach for isolating individual bacterial cells and amplifying … Ph.D. in Marine Biology/Biochemistry, University of Delaware BA in Biology, Boston University ( magna cum …

… to replicate themselves and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. They can be found in … MGEs based upon their gene content and their genetic sequences. The software was created by researchers under the … Exascale Computing Project (17-SC-20-SC), a collaborative effort of the U.S. Department of Energy Office of Science and …

… Kelly Wrighton and her group at Colorado State University in Fort Collins have a massive undertaking: sequencing the …