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Protocol for single-cell isolation and genome amplification of environmental microbial eukaryotes for genomic analysis
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Marine Microbe Contains Multitudes
Hawaii Ocean Time-series (HOT), they collected samples of the ocean’s microbial communities periodically at … Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … the sequence of a “marker gene,” namely the 16S ribosomal RNA (rRNA) gene, to mark or identify microbial species. All …
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What Happens Underground Influences Global Nutrient Cycles
DOE user facilities EMSL and JGI announce FY 2020 collaborative … energy generation and environmental characterization and cleanup. The JGI provides integrated high-throughput … some of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science …
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A Collaboration to Improve Plant Genome Annotations Across Species
… of Energy (DOE) Joint Genome Institute (JGI)*, a national user facility located at Lawrence Berkeley National … experimental conditions, tissue types, and analytical protocols that permit gene expression analysis across plants … of the members from the initial team contributed additional sample sets, such as sorghum internode time course data from …
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Natural Prodcast Episode 8: Eric Schmidt
… of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence Berkeley National Lab. You can find links to transcripts, more information on this episode, and our other episodes at … collaborate, let us know! Find out more at jgi.doe.gov/user-programs . Thanks, and see you next time!  … Episode …
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Examples: Successful LOIs & Submissions
Genomics, and Facilities Integrating Collaborations for User Science calls. These documents have been shared with …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… at West Virginia University (WVU), led the study’s international team, which included scientists from Oak Ridge … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and the National Key Project for Basic Research (2012CB114504). The work conducted by the U.S. Department of …
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Ecosystem Fabrication (EcoFAB) Protocols for The Construction of Laboratory Ecosystems Designed to Study Plant-microbe Interactions
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… to go beyond understanding which microbes are present in a sample, to generate data about which organisms are active, … methane and organic matter.  However, to get all of the information that SIP offers, researchers must take on a … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Bidirectional titration of yeast gene expression using a pooled CRISPR guide RNA approach
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Standardized naming of microbiome samples in Genomes OnLine Database.
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… environment of comparable salinity.  Researchers collected samples at several points in time to assess nutrient … conditions. This was facilitated in part by RNA library preparation and sequencing from the U.S. Department of … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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