Search

Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of … “learned” to identify data generated in part through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact The class  …

JGI is in the process of shifting its operations from Walnut … installed at the  Integrative Genomics Building , JGI’s newly-built home located in the heart of the Berkeley Lab … and their equipment from 4 single-story buildings to a new 4-story building 20 miles away in another city and …

… ancestral and present-day plants The Science In a recent  Nature Genetics paper , researchers focused on the full … 35 major evolutionary plant lineages in the  Open Green Genomes Initiative , a project supported by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number … from environmental samples — to identify over 27,000 microbial genes. These genes were identified based on their … coherent pieces called contigs — into genes and even into genomes — from these environmental samples,” said Matthias …

… at Lawrence Berkeley National Laboratory (Berkeley Lab) uncovered a broad diversity of large and giant viruses that … noted study senior author  Tanja Woyke , who heads JGI’s  Microbial Program . The team mined more than 8,500 publicly … environmental conditions. Function prediction on the 2,000 new giant virus genomes led the team to uncover a prevalence …

… including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all … how plants self-organize, influence, and are influenced by microbial partners. We use a variety of genomics-powered … 10.1371/journal.pbio.2002860 … Postdocs: Margot Bezrutczyk (JGI Postdoc) Lamprinos Frantzeskakis (JGI Postdoc) Interns: …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number … on green algae. “The Chlamy genome launched over a dozen of new Chlamydomonas genome-related Community Science Program … impact. Her lab has sequenced four additional green algal genomes using Chlamy as a reference for functional …

WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing unit … and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore … assistance from mentors and a team to port their code to a new architecture. Proposals are due March 1, 2019 for the …

… in soils and water. MGEs like viruses and plasmids drive microbial processes and evolution. This is because MGEs can … affect a microbe’s ability to cycle nutrients or produce new chemicals. They can also affect ecosystems by killing … Resource (IMG/VR) , now with more than 15 million viral genomes. It was also key to developing the first version of …

…   Each year, the JGI accepts proposals for state-of-the-art functional … Genomics call , we look for projects that will leverage the JGI’s DNA synthesis and omics capabilities to enhance … to reveal metabolic pathways that could ultimately enable new or more efficient biotechnologies.  Below find a list of …