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Game On: High School Students Drive Everglades Metagenomics Study
… email request reached  Emiley Eloe-Fadrosh , the Metagenome Program Head at the  U.S. Department of Energy … class decided to do an environmental microbial community (metagenomic) soil study in an untouched region of the … for the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) portal for their sample analysis.  The class had to …
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JGI Portals
… Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all … comprehensive access to information regarding genome and metagenome sequencing projects, and their associated metadata, … capability of microbial communities based on their metagenome sequence, in the context of reference isolate …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… for a stressed typical plant, one that does what’s called C3 metabolism, named for a 3-carbon compound that plays an essential role. But other … yuccas is that there are closely related species that use C3 and CAM. ALISON: But plants don’t need to be restricted …
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Micro-Scale Applications Group
… the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes internal analytical … Stable isotope probing metagenomics …
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Permanent Improved High-Quality Draft Genome Sequence of Nocardia casuarinae Strain BMG51109, an Endophyte of Actinorhizal Root Nodules of Casuarina glauca
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Identifying the Microbial Cleanup Crew at a Superfund Site
… Science Program , they were able to analyze the resulting metagenomic data. (Data from the project are available on the  … the JGI’s  Integrated Microbial Genomes and Microbiomes (IMG/M) system. For example, the team has since identified  … However, the microbial strain’s genome sequence was not in IMG/M when the NRAP samples were originally analyzed a …
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New Microviridae isolated from Sulfitobacter reveals two cosmopolitan subfamilies of single-stranded DNA phages infecting marine and terrestrial Alphaproteobacteria
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Doubling Down on Known Protein Families
… big the room is.  A new study  published online Oct. 11, 2023 in  Nature highlights the vast array of functional … available  Integrated Microbial Genomes & Microbiomes (IMG/M) database, they successfully crafted the Novel Metagenome Protein Families (NMPF) Catalog.  “We can now …
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Water aging and the quality of organic carbon sources drive niche partitioning of the active bathypelagic prokaryotic microbiome
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Triggering Morel Fruiting
… China, and a wild black morel strain M. importuna CCBAS932 from the forests of France, were sequenced and annotated …
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UC Merced Interns Reflect on Their JGI Summer Projects
… in science. Since the program’s inception, more than 30 students have contributed to the research of JGI …
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Natural Prodcast Episode 1: The Primer, Part 1
… tree and became incorporated. And because it had some advantage to the tree – it almost certainly, you know, prevents … the basics in this field. This, along with parts 2 and 3, should be a great place to start if you don’t know much …
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