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The Metadata Coverage Index (MCI): A standardized metric for quantifying database metadata richness
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Digging into Microbial Ecosystems Deep Underground
… work builds off a proposal approved through a collaborative science initiative called Facilities Integrating Collaborations for User Science (FICUS) . Through FICUS, the researchers have tapped … National Laboratory. Letters of Intent are due March 16, 2022 to freely access resources at multiple DOE user …
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David Goodstein
… basal metazoans and plants. Working with a talented team of scientists and software engineers, Dr. Goodstein currently … for the JGI's direct collaborators and the wider plant science community. Dr. Goodstein’s group also develops and … acids research 51 (16), 8383-8401. JT Lovell et al., 2022. GENESPACE tracks regions of interest and gene copy …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … our collaborations and capabilities to enable great science that will help solve energy and environmental … which itself was finally deemed complete on April 1, 2022. After completing the human genome, the JGI became a …
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JGI@25: Roots of a Mutualist Relationship
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … our collaborations and capabilities to enable great science that will help solve energy and environmental … a broader ecosystem perspective, involving more multidisciplinary teams. The work also paved the way for a …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… celebrates research enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to … them to environmental and energy challenges. But not all scientists have the expertise and resources to do DNA design … of specialized metabolism in bioenergy crops: current progress and challenges , details how an interdisciplinary …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … our collaborations and capabilities to enable great science that will help solve energy and environmental …
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JGI Scientists Pen Genome Watch Articles
Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … “Given the great expertise in microbial genomics and metagenomics of the microbiology-focused groups at the Joint … opportunity for JGI to work on these, as it allows us to highlight hot topics in genomics.” And it makes sense to …
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Comparative single-cell genomics reveals potential ecological niches for the freshwater acI Actinobacteria lineage
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a written … and Wint is slated to lead the workshop again in the 2022 program. “I’m excited — I’m always glad to pay it … Conserved Patterns of Adaptive Evolution . Mol Biol Evol. 2022 Feb 3;39(2):msab372.doi: 10.1093/molbev/msab372.   …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … our collaborations and capabilities to enable great science that will help solve energy and environmental … of the tree of life. Used in tandem over the years, metagenomics and single cell genomics have afforded JGI users …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … our collaborations and capabilities to enable great science that will help solve energy and environmental … Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. …
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